RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
PTPN5-201ENST00000358540 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
PTPN5-201ENST00000358540 CDCA5Q96FF9 252 aa17.15■□□□□ 0.34
PTPN5-201ENST00000358540 MSTO1Q9BUK6 570 aa17.15■□□□□ 0.34
PTPN5-201ENST00000358540 HSF2BPO75031 334 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 HLA-DRAP01903 254 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 GJB1P08034 283 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 SRGAP2CP0DJJ0 459 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 PIK3CAP42336 1068 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 CRELD2Q6UXH1 353 aaPredicted RBP17.14■□□□□ 0.34
PTPN5-201ENST00000358540 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.34
PTPN5-201ENST00000358540 NUP85Q9BW27 656 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 DPH5Q9H2P9 285 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.34
PTPN5-201ENST00000358540 RBAKQ9NYW8 714 aaPredicted RBP17.14■□□□□ 0.34
PTPN5-201ENST00000358540 ATP8B3O60423 1300 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 CES2O00748 559 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 KRT14P02533 472 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 COMTP21964 271 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 ARL2P36404 184 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 MIEF2Q96C03 454 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 NEUROG2Q9H2A3 272 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 SATB1Q01826 763 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 IFT88Q13099 833 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 MICALCLQ6ZW33 695 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 USP37Q86T82 979 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 RHOT2Q8IXI1 618 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 RASGEF1CQ8N431 466 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
PTPN5-201ENST00000358540 DAAM1Q9Y4D1 1078 aa17.14■□□□□ 0.33
PTPN5-201ENST00000358540 PMM2O15305 246 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTPN5-201ENST00000358540 EDNRBP24530 442 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 NAMPTP43490 491 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 SEC24CP53992 1094 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 CDR2Q01850 454 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 NNTQ13423 1086 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 CDR2LQ86X02 465 aaPredicted RBP17.13■□□□□ 0.33
PTPN5-201ENST00000358540 ERO1BQ86YB8 467 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 PASD1Q8IV76 773 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 OR5B17Q8NGF7 314 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 RBPJLQ9UBG7 517 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 MCM8Q9UJA3 840 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 UMODL1Q5DID0 1318 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 TNFSF9P41273 254 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 CDR1P51861 262 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 SKOR1P84550 965 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 EAPPQ56P03 285 aaPredicted RBP17.13■□□□□ 0.33
PTPN5-201ENST00000358540 ZNF564Q8TBZ8 553 aaPredicted RBP17.13■□□□□ 0.33
PTPN5-201ENST00000358540 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 FGD4Q96M96 766 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 TCHPQ9BT92 498 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 PTPRFP10586 1907 aa17.13■□□□□ 0.33
PTPN5-201ENST00000358540 IGKV6D-21A0A0A0MT36 114 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 DAPK3O43293 454 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 CFHP08603 1231 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 TNFRSF8P28908 595 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 LSP1P33241 339 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 MKRN3Q13064 507 aaKnown RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 CEP85LQ5SZL2 805 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 ANKRD13AQ8IZ07 590 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 CPA5Q8WXQ8 436 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 DDX1Q92499 740 aaKnown RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 RUBCNQ92622 972 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 KCNG1Q9UIX4 513 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 VNN1O95497 513 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 PSMD6Q15008 389 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 GJC2Q5T442 439 aaPredicted RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 APOBEC3GQ9HC16 384 aaKnown RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 OTOFQ9HC10 1997 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 NEBLO76041 1014 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 CYP2C8P10632 490 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 NIFKQ9BYG3 293 aaKnown RBP17.12■□□□□ 0.33
PTPN5-201ENST00000358540 SPON1Q9HCB6 807 aa17.12■□□□□ 0.33
PTPN5-201ENST00000358540 H0YCG3 227 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 SOCS7O14512 581 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 SPOPO43791 374 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 GTF2H1P32780 548 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
PTPN5-201ENST00000358540 ZACNQ401N2 412 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
PTPN5-201ENST00000358540 WDR44Q5JSH3 913 aa17.11■□□□□ 0.33
PTPN5-201ENST00000358540 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms