RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MMP13P45452 471 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 TAS2R40P59535 323 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 CDR2Q01850 454 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 DHX34Q14147 1143 aaKnown RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 SGO2Q562F6 1265 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 DLK2Q6UY11 383 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 TAB3Q8N5C8 712 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 TMEM143Q96AN5 459 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 UBE4BO95155 1302 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 NUDT17P0C025 328 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 ETS1P14921 441 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 DSG3P32926 999 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 NCKAP1LP55160 1127 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 ZKSCAN8Q15776 578 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 CYP1A2P05177 515 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 PDE6CP51160 858 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 SNCBQ16143 134 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 CCT6BQ92526 530 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 ART4Q93070 314 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 C11orf70Q9BRQ4 267 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 XPNPEP1Q9NQW7 623 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 FAM187AA6NFU0 413 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 RASGRF2O14827 1237 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 KRT10P13645 584 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 MAPK4P31152 587 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 NLRP11P59045 1033 aaKnown RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 FBXL13Q8NEE6 735 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 BICD1Q96G01 975 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 INTS9Q9NV88 658 aaKnown RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 RASSF9O75901 435 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 ITGA8P53708 1063 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 MFAP3P55082 362 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 SWT1Q5T5J6 900 aaKnown RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 KAZNQ674X7 775 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 CCDC50Q8IVM0 306 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 CCDC60Q8IWA6 550 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-203ENST00000356948 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
PTBP1-203ENST00000356948 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 RALAP11233 206 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 RWDD2BP57060 319 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 CXCL9Q07325 125 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 FAM160B2Q86V87 743 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 NAP1L3Q99457 506 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 PXMP2Q9NR77 195 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 IVDP26440 423 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 RPAP3Q9H6T3 665 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 APOBEC3GQ9HC16 384 aaKnown RBP16.27■□□□□ 0.2
PTBP1-203ENST00000356948 FGFR1OP2Q9NVK5 253 aa16.27■□□□□ 0.2
PTBP1-203ENST00000356948 C5orf60A6NFR6 353 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 MIF4GDA9UHW6 222 aaKnown RBP16.27■□□□□ 0.19
PTBP1-203ENST00000356948 PAEPP09466 180 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 PSMC5P62195 406 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 SP2Q02086 613 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 CYP24A1Q07973 514 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 MTERF2Q49AM1 385 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 TXNRD3NBQ6F5E7 133 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 ACAD10Q6JQN1 1059 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 WNT8AQ9H1J5 351 aa16.27■□□□□ 0.19
PTBP1-203ENST00000356948 SEPT9Q9UHD8 586 aaPredicted RBP16.27■□□□□ 0.19
PTBP1-203ENST00000356948 A6NNZ2 444 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 BANF1O75531 89 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 ECEL1O95672 775 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 HADHBP55084 474 aaKnown RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 DMP1Q13316 513 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 TUBB8Q3ZCM7 444 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 FUKQ8N0W3 1084 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 SPDL1Q96EA4 605 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 RASAL2Q9UJF2 1139 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 TRIM33Q9UPN9 1127 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 MYPNQ86TC9 1320 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 ASNSP08243 561 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 RPL7AP62424 266 aaKnown RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 CNGA2Q16280 664 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 RSRC1Q96IZ7 334 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms