RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 IGDCC4Q8TDY8 1250 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 SLC1A1P43005 524 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 NYAP2Q9P242 653 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 SLC4A7Q9Y6M7 1214 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 PRKCEQ02156 737 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 DHX34Q14147 1143 aaKnown RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 LRRC71Q8N4P6 559 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 RBBP8NLQ8NC74 664 aaPredicted RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 ASPSCR1Q9BZE9 553 aa13.93□□□□□ -0.18
SCN8A-202ENST00000355133 TRIM45Q9H8W5 580 aaPredicted RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 NOP53Q9NZM5 478 aaKnown RBP13.93□□□□□ -0.18
SCN8A-202ENST00000355133 ZNF609O15014 1411 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 RPS6KA5O75582 802 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ATP5HO75947 161 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SERPIND1P05546 499 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 GFAPP14136 432 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 FMO5P49326 533 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 TKFCQ3LXA3 575 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 FAM49BQ9NUQ9 324 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ZNF197O14709 1029 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ATL2Q8NHH9 583 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 STK33Q9BYT3 514 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ZSCAN9O15535 394 aaPredicted RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ENTPD3O75355 529 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SBK1Q52WX2 424 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 LRRC8EQ6NSJ5 796 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ZNF34Q8IZ26 560 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 RFWD2Q8NHY2 731 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SENP7Q9BQF6 1050 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 CENPKQ9BS16 269 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 KIFC3Q9BVG8 833 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 CCSER1Q9C0I3 900 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 LSM7Q9UK45 103 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 C3orf70A6NLC5 250 aaPredicted RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 HNRNPH2P55795 449 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 DEUP1Q05D60 604 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SF3B3Q15393 1217 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 SGSM1Q2NKQ1 1148 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 P3H1Q32P28 736 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 IER5Q5VY09 327 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 TAGAPQ8N103 731 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ATPAF2Q8N5M1 289 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ATP6V1G3Q96LB4 118 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
SCN8A-202ENST00000355133 ZDHHC9Q9Y397 364 aa13.92□□□□□ -0.18
SCN8A-202ENST00000355133 MYMKA6NI61 221 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 SYTL3Q4VX76 610 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 ZC3H12BQ5HYM0 836 aaKnown RBP13.91□□□□□ -0.18
SCN8A-202ENST00000355133 C16orf86Q6ZW13 317 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 NLRP14Q86W24 1093 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 CHP1Q99653 195 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 VCPKMTQ9H867 229 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 APRTP07741 180 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 ITGA4P13612 1032 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 TSGA10IPQ3SY00 556 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 AP1ARQ63HQ0 302 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 IL31Q6EBC2 164 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 NUDT18Q6ZVK8 323 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 TET3O43151 1660 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 STXBP3O00186 592 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 TLR2O60603 784 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 GMPSP49915 693 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-202ENST00000355133 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 DPYDQ12882 1025 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-202ENST00000355133 CUL3Q13618 768 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 NAA30Q147X3 362 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-202ENST00000355133 C7orf25Q9BPX7 421 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 MUC3BQ9H195 1237 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 SNX5Q9Y5X3 404 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 PRRG1O14668 218 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 PYGLP06737 847 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 PDHBP11177 359 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 GALCP54803 685 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 E2F4Q16254 413 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
SCN8A-202ENST00000355133 SPATA4Q8NEY3 305 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms