RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 HAO1Q9UJM8 370 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 SNX24Q9Y343 169 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 UTP11Q9Y3A2 253 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 ZNF711Q9Y462 761 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 USP15Q9Y4E8 981 aaPredicted RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 EMSYQ7Z589 1322 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 UTRNP46939 3433 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 IPO5O00410 1097 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 ATP9AO75110 1047 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MAGEA8P43361 318 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 PTDSS1P48651 473 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 PEX5P50542 639 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MCL1Q07820 350 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MESDQ14696 234 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 TNIP1Q15025 636 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 DENND2CQ68D51 928 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 HOOK3Q86VS8 718 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CPNE8Q86YQ8 564 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 SYCE1Q8N0S2 351 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 GMCL1P1Q8NEA9 526 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 EPS8L3Q8TE67 593 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CBWD1Q9BRT8 395 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 STK33Q9BYT3 514 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CARD9Q9H257 536 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 RBM47A0AV96 593 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 LIN7AO14910 233 aaPredicted RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 BMT2Q1RMZ1 405 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 DCAF12L1Q5VU92 463 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 RINLQ6ZS11 566 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 ANKRD23Q86SG2 305 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 RNF168Q8IYW5 571 aaPredicted RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 ALG3Q92685 438 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CCDC127Q96BQ5 260 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 RMDN2Q96LZ7 410 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MAF1Q9H063 256 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 SUCLA2Q9P2R7 463 aaPredicted RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 APEX2Q9UBZ4 518 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MYH11P35749 1972 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 CAPN15O75808 1086 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 LMNB1P20700 586 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 FGFR4P22455 802 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 CUL1Q13616 776 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 UBAP2Q5T6F2 1119 aaKnown RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 LRIG3Q6UXM1 1119 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PHLDB2Q86SQ0 1253 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 ARHGEF19Q8IW93 802 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 KRT35Q92764 455 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 CNOT10Q9H9A5 744 aaKnown RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 GPRC5CQ9NQ84 441 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 TMOD2Q9NZR1 351 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 COG5Q9UP83 839 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 H0YGN5 161 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 NVLO15381 856 aaKnown RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 NPTXRO95502 500 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 CALCAP01258 141 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 FTLP02792 175 aaPredicted RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 ATP6V1C1P21283 382 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 EPHB2P29323 1055 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 BFSP1Q12934 665 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 DGKZQ13574 1117 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 MTMR3Q13615 1198 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PADI6Q6TGC4 694 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 NSMFQ6X4W1 530 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 SDCCAG8Q86SQ7 713 aaPredicted RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 MREGQ8N565 214 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 FITM2Q8N6M3 262 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 DNAJC1Q96KC8 554 aaKnown RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 ZNF317Q96PQ6 595 aaPredicted RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 FIZ1Q96SL8 496 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 RNPEPL1Q9HAU8 725 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PTPN22Q9Y2R2 807 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 NFS1Q9Y697 457 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 SCN9AQ15858 1988 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 CCDC188H7C350 402 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 NPM3O75607 178 aaKnown RBP9.98□□□□□ -0.81
SMG6-202ENST00000354901 SPATA31D3P0C874 917 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PDE6CP51160 858 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 ZNF131P52739 623 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 BPIFB4P59827 614 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PPP3CAQ08209 521 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 ITIH4Q14624 930 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 AGBL2Q5U5Z8 902 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 FOXB2Q5VYV0 432 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 SPATA31D4Q6ZUB0 917 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 MIER3Q7Z3K6 550 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 LDHDQ86WU2 507 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 ERP27Q96DN0 273 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 HES6Q96HZ4 224 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 FMO2Q99518 471 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 TEKT3Q9BXF9 490 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 TUFT1Q9NNX1 390 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms