RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 REXO1L1PQ8IX06 675 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 RNF139Q8WU17 664 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SLC35C1Q96A29 364 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 HSD17B14Q9BPX1 270 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SSU72P8A0A1W2PR75 194 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 PTGER2P43116 358 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 NAMPTP43490 491 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 DLG4P78352 724 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 MCF2LO15068 1137 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 OAZ1P54368 228 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 MYL6P60660 151 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 CXCL17Q6UXB2 119 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 GRK7Q8WTQ7 553 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
PCDHB11-201ENST00000354757 CCNE2O96020 404 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 TGFB3P10600 412 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 AKAP5P24588 427 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SDC4P31431 198 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ITIH3Q06033 890 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ZC3H18Q86VM9 953 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 NOA1Q8NC60 698 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 COG1Q8WTW3 980 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 HPDLQ96IR7 371 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ABHD16BQ9H3Z7 469 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 HES2Q9Y543 173 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 LPXNO60711 386 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 MMEP08473 750 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 RAP1GAPP47736 663 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 RBP5P82980 135 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SGSM1Q2NKQ1 1148 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 MCEEQ96PE7 176 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 FZD9O00144 591 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 CCDC14Q49A88 953 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 LRRC1Q9BTT6 524 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ANAPC5Q9UJX4 755 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SNX12Q9UMY4 172 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ANO9A1A5B4 782 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ASAP2O43150 1006 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 KRT3P12035 628 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 KCNJ1P48048 391 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 CPT1AP50416 773 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 PPP2R5EQ16537 467 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 ANO5Q75V66 913 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 DNAAF3Q8N9W5 541 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 DHX35Q9H5Z1 703 aaKnown RBP13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 C17orf75Q9HAS0 396 aa13.13□□□□□ -0.31
PCDHB11-201ENST00000354757 SNED1Q8TER0 1413 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 B3GAT3O94766 335 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 CPB1P15086 417 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 GMLQ99445 158 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 FMO2Q99518 471 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
PCDHB11-201ENST00000354757 MXRA7P84157 204 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms