RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CTIFO43310 598 aaKnown RBP16.3■□□□□ 0.2
PTPRO-202ENST00000348962 LAMB3Q13751 1172 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 FSCBQ5H9T9 825 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 KRT82Q9NSB4 513 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 FGFR1OP2Q9NVK5 253 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 APOBEC2Q9Y235 224 aaKnown RBP16.3■□□□□ 0.2
PTPRO-202ENST00000348962 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRO-202ENST00000348962 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 MEI1Q5TIA1 1274 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 NUGGCQ68CJ6 796 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 CCDC138Q96M89 665 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 AGLP35573 1532 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 GRID2IPA4D2P6 1211 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 RFX5P48382 616 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-202ENST00000348962 INPP1P49441 399 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-202ENST00000348962 PDIA6Q15084 440 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 AIPL1Q9NZN9 384 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 SLC4A7Q9Y6M7 1214 aa16.3■□□□□ 0.2
PTPRO-202ENST00000348962 A0A087WUV0 522 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 CYP11B2P19099 503 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 HADHAP40939 763 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 HARS2P49590 506 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 NPEPPSP55786 919 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 EIF3EP60228 445 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 DEUP1Q05D60 604 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 PDIA2Q13087 525 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 IL31Q6EBC2 164 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ACER1Q8TDN7 264 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 FOPNLQ96NB1 174 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TRIM15Q9C019 465 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 EXTL3O43909 919 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 NPTXRO95502 500 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ARHGEF7Q14155 803 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ATPAF2Q8N5M1 289 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 DDX27Q96GQ7 796 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TARS2Q9BW92 718 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TSSK1BQ9BXA7 367 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 PITPNM3Q9BZ71 974 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 MUC3BQ9H195 1237 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 F5H423 210 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TEX33O43247 280 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ATP9BO43861 1147 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TYK2P29597 1187 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 NIF3L1Q9GZT8 377 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 PCDHB2Q9Y5E7 798 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 MAPK13O15264 365 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 FOXN1O15353 648 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 HLA-DRAP01903 254 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TBC1D1Q86TI0 1168 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 ARHGAP18Q8N392 663 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 NCLNQ969V3 563 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 PABPC5Q96DU9 382 aaKnown RBP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPRO-202ENST00000348962 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
PTPRO-202ENST00000348962 HIST1H2AGP0C0S8 130 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 HIST1H2ADP20671 130 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 CASP8Q14790 479 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 TRIM68Q6AZZ1 485 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 CCDC137Q6PK04 289 aaKnown RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 RCOR2Q8IZ40 523 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 HIST1H2AHQ96KK5 128 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 HIST1H2AJQ99878 128 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 SENP7Q9BQF6 1050 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 H2AFJQ9BTM1 129 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 MYMKA6NI61 221 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 MORF4L2Q15014 288 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 EFHC1Q5JVL4 640 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 KPNA6O60684 536 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 ARHGDIAP52565 204 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 NFIAQ12857 509 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 TBCCQ15814 346 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 PPHLN1Q8NEY8 458 aaKnown RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 PPP1R2P1Q96PQ5 205 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 OSBPL9Q96SU4 736 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 FAM49BQ9NUQ9 324 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 ZFATQ9P243 1243 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 PCDHGB4Q9UN71 923 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 MANSC4A6NHS7 340 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-202ENST00000348962 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 P4HA2O15460 535 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 ARL4DP49703 201 aa16.28■□□□□ 0.2
PTPRO-202ENST00000348962 FBXW4P57775 412 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms