RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 TSNAXIP1Q2TAA8 658 aa16.94■□□□□ 0.3
HMGA1-202ENST00000347617 VSTM1Q6UX27 236 aa16.94■□□□□ 0.3
HMGA1-202ENST00000347617 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
HMGA1-202ENST00000347617 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
HMGA1-202ENST00000347617 ALG6Q9Y672 507 aa16.94■□□□□ 0.3
HMGA1-202ENST00000347617 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 POTEB3A0JP26 581 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 POTECB2RU33 542 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 MEIS1O00470 390 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 VWA5AO00534 786 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 MSH4O15457 936 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 PECAM1P16284 738 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-202ENST00000347617 ATP6V1C1P21283 382 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 RPA1P27694 616 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 DSG3P32926 999 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 NR1H3Q13133 447 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 COG2Q14746 738 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 DRAP1Q14919 205 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-202ENST00000347617 CEP55Q53EZ4 464 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 POTEBQ6S5H4 581 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 FITM2Q8N6M3 262 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 ZFAND2BQ8WV99 257 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 C18orf8Q96DM3 657 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 OLFML3Q9NRN5 406 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 ETAA1Q9NY74 926 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 HOXC10Q9NYD6 342 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 DBR1Q9UK59 544 aaKnown RBP16.93■□□□□ 0.3
HMGA1-202ENST00000347617 DNAJC12Q9UKB3 198 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 AJAP1Q9UKB5 411 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-202ENST00000347617 STK38LQ9Y2H1 464 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-202ENST00000347617 SMCHD1A6NHR9 2005 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 ASTN1O14525 1302 aa16.93■□□□□ 0.3
HMGA1-202ENST00000347617 SKAP2O75563 359 aaPredicted RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 DCTN3O75935 186 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ECEL1O95672 775 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ACADSP16219 412 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 FGFR4P22455 802 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CNGA1P29973 690 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 STX2P32856 288 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 PRAMEF18Q5VWM3 479 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 SLC30A9Q6PML9 568 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 STK32AQ8WU08 396 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ALG3Q92685 438 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 TGS1Q96RS0 853 aaKnown RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CCDC77Q9BR77 488 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 POLR3CQ9BUI4 534 aaPredicted RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 LRRC19Q9H756 370 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CYP39A1Q9NYL5 469 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 STARD13Q9Y3M8 1113 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 POLR2AP24928 1970 aaKnown RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 NPHP3-ACAD11A0A0J9YXS1 232 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 TBCAO75347 108 aaKnown RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 LINGO3P0C6S8 592 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ALDH3A1P30838 453 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 FMO5P49326 533 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 GPC5P78333 572 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 IL9RQ01113 521 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 XRRA1Q6P2D8 792 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CCDC105Q8IYK2 499 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 FAM186BQ8IYM0 893 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 PIGOQ8TEQ8 1089 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 PRCCQ92733 491 aaPredicted RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 CDC42EP4Q9H3Q1 356 aaKnown RBP16.92■□□□□ 0.3
HMGA1-202ENST00000347617 UBN1Q9NPG3 1134 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 VAV3Q9UKW4 847 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 USH1CQ9Y6N9 552 aa16.92■□□□□ 0.3
HMGA1-202ENST00000347617 IGSF9BQ9UPX0 1349 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 MAPK13O15264 365 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 MAGEB2O15479 319 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 ATP4AP20648 1035 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 HOXD13P35453 343 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 SLCO1A2P46721 670 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 POLGP54098 1239 aaPredicted RBP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 SLC18A1P54219 525 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 YARSP54577 528 aaKnown RBP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 ZNF211Q13398 564 aaPredicted RBP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 BIRC2Q13490 618 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 RGS9BPQ6ZS82 235 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 STXBP4Q6ZWJ1 553 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 SLC13A5Q86YT5 568 aaPredicted RBP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.91■□□□□ 0.3
HMGA1-202ENST00000347617 BBOF1Q8ND07 529 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 GRK7Q8WTQ7 553 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 ARHGEF26Q96DR7 871 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 TSC22D3Q99576 134 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 RIT2Q99578 217 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
HMGA1-202ENST00000347617 WDR11Q9BZH6 1224 aa16.91■□□□□ 0.3
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