RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 LRRC53A6NM62 1247 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 TLR3O15455 904 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 NRDCO43847 1150 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PQBP1O60828 265 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 HLA-DRAP01903 254 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 HNRNPH3P31942 346 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 BIRC3Q13489 604 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 BFSP2Q13515 415 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 TSR1Q2NL82 804 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 TRAPPC11Q7Z392 1133 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 SMG8Q8ND04 991 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 MTMR12Q9C0I1 747 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 NUCKS1Q9H1E3 243 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 AJAP1Q9UKB5 411 aaPredicted RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 IPPQ9Y573 584 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PDCD11Q14690 1871 aaKnown RBP17.64■□□□□ 0.42
CEACAM1-202ENST00000344391 TMEM191BP0C7N4 346 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 SELPP16109 830 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 RFX1P22670 979 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 DSC3Q14574 896 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 MEA1Q16626 185 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 JADE1Q6IE81 842 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 WDR59Q6PJI9 974 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 LRRC8DQ7L1W4 858 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 SYN2Q92777 582 aaPredicted RBP17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 ANKRD36BP1Q96IX9 119 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 SNX27Q96L92 541 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 TOX2Q96NM4 488 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 PRDM10Q9NQV6 1147 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 DNAJC12Q9UKB3 198 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 PYCARDQ9ULZ3 195 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 MYO6Q9UM54 1294 aa17.64■□□□□ 0.41
CEACAM1-202ENST00000344391 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 ZC3H11AO75152 810 aaKnown RBP eCLIP17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 TNNC2P02585 160 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 NFICP08651 508 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 CAPN2P17655 700 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 JAM2P57087 298 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 E4F1Q66K89 784 aaPredicted RBP17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 ALKAL1Q6UXT8 129 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 NT5DC4Q86YG4 428 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 ARHGEF19Q8IW93 802 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 TRAIPQ9BWF2 469 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 C2CD2Q9Y426 696 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 PCDHB2Q9Y5E7 798 aa17.63■□□□□ 0.41
CEACAM1-202ENST00000344391 ARHGAP6O43182 974 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 MGEA5O60502 916 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 PHACTR2O75167 634 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 RECQL4O94761 1208 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 AKAP5P24588 427 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 PIK3CAP42336 1068 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 TLE2Q04725 743 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 NCOA4Q13772 614 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 TMTC1Q8IUR5 882 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 NT5C1BQ96P26 610 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 SPAG5Q96R06 1193 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 TMEM106CQ9BVX2 250 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 CXCL16Q9H2A7 254 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 UBE2TQ9NPD8 197 aaPredicted RBP17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 ZNHIT6Q9NWK9 470 aaKnown RBP17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 DERAQ9Y315 318 aa17.62■□□□□ 0.41
CEACAM1-202ENST00000344391 DCDC2CA8MYV0 355 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 CDK17Q00537 523 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 TMEM132DQ14C87 1099 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 TRIM60Q495X7 471 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 XKR4Q5GH76 650 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 SFMBT2Q5VUG0 894 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 SCARA3Q6AZY7 606 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 CYP26C1Q6V0L0 522 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 HELQQ8TDG4 1101 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 PAWRQ96IZ0 340 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 CHP1Q99653 195 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 PI4K2AQ9BTU6 479 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 C11orf49Q9H6J7 331 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 AIPL1Q9NZN9 384 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 CNTN3Q9P232 1028 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 ZNF623O75123 536 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 DRAP1Q14919 205 aaPredicted RBP17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 ZBTB6Q15916 424 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 WDR44Q5JSH3 913 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 C1orf127Q8N9H9 656 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 KIAA1524Q8TCG1 905 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 TATDN2Q93075 761 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 KIF12Q96FN5 646 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 ZMAT2Q96NC0 199 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
CEACAM1-202ENST00000344391 GPR88Q9GZN0 384 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms