RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 KRT3P12035 628 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 CIITAP33076 1130 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 CDH6P55285 790 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 SKOR1P84550 965 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 KLHL38Q2WGJ6 581 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 EDRF1Q3B7T1 1238 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 THEMIS2Q5TEJ8 643 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 PRAMEF18Q5VWM3 479 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 RAB44Q7Z6P3 723 aaPredicted RBP8.52□□□□□ -1.04
UBE4B-202ENST00000343090 JAMLQ86YT9 394 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 MFN1Q8IWA4 741 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 ELOA2Q8IYF1 753 aaPredicted RBP8.52□□□□□ -1.04
UBE4B-202ENST00000343090 RNF149Q8NC42 400 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 AGR3Q8TD06 166 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 ATXN7L3BQ96GX2 97 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 DNAJC7Q99615 494 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 TUBB6Q9BUF5 446 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 MRPL4Q9BYD3 311 aaKnown RBP8.52□□□□□ -1.04
UBE4B-202ENST00000343090 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.04
UBE4B-202ENST00000343090 ANLNQ9NQW6 1124 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 PARVAQ9NVD7 372 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 NYAP2Q9P242 653 aa8.52□□□□□ -1.04
UBE4B-202ENST00000343090 KDM6AO15550 1401 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 GPR75-ASB3A0A0A6YYF3 556 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ESYT2A0FGR8 921 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 POLRMTO00411 1230 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 OPLAHO14841 1288 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 KRT38O76015 456 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TAL1P17542 331 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 HSD17B3P37058 310 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 HSPA9P38646 679 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 PHKA2P46019 1235 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 EPHB1P54762 984 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 GSCP56915 257 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 COPS2P61201 443 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 CDR2Q01850 454 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ROR1Q01973 937 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TTMPQ5BVD1 217 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 PAPD7Q5XG87 772 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 LRRC34Q8IZ02 419 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 C4orf33Q8N1A6 199 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 BTBD6Q96KE9 485 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 SPATA33Q96N06 139 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 DHX35Q9H5Z1 703 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ACAD9Q9H845 621 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 MED24O75448 989 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TTC4O95801 387 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 MYL3P08590 195 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 PECAM1P16284 738 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 FGFR2P21802 821 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 NPEPPSP55786 919 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 BCAR1P56945 870 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TBX2Q13207 712 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 NME3Q13232 169 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 BYSLQ13895 437 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 MDH1BQ5I0G3 518 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ZNF772Q68DY9 489 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TTI2Q6NXR4 508 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ABI1Q8IZP0 508 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 CASKIN2Q8WXE0 1202 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 FAM167AQ96KS9 214 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TMBIM4Q9HC24 238 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ALG6Q9Y672 507 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 KIF20BQ96Q89 1820 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 PREX1Q8TCU6 1659 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 A0A087X0B3 334 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TCRBV5S4A2TA0A5A2 114 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ARFIP2P53365 341 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 CASP7P55210 303 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ELF3P78545 371 aaPredicted RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 AP1B1Q10567 949 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 WDR72Q3MJ13 1102 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 WDR75Q8IWA0 830 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ATL2Q8NHH9 583 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 DTX3LQ8TDB6 740 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 AENQ8WTP8 325 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 SNRNP27Q8WVK2 155 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 CRAMP1Q96RY5 1269 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 EPS15L1Q9UBC2 864 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ANGPTL3Q9Y5C1 460 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 GGPS1O95749 300 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 KRT7P08729 469 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 RPA1P27694 616 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 CASP4P49662 377 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 NR1H3Q13133 447 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 HABP4Q5JVS0 413 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.05
UBE4B-202ENST00000343090 RNF139Q8WU17 664 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 AGXT2Q9BYV1 514 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 THAP2Q9H0W7 228 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 TRABDQ9H4I3 376 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 ABCF3Q9NUQ8 709 aa8.52□□□□□ -1.05
UBE4B-202ENST00000343090 MSH4O15457 936 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms