RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
RTN3-203ENST00000341307 INPP5DQ92835 1189 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 NMD3Q96D46 503 aaKnown RBP12.62□□□□□ -0.39
RTN3-203ENST00000341307 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 GMLQ99445 158 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 TMEM39BQ9GZU3 492 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 ITGB1BP2Q9UKP3 347 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 PLAGL2Q9UPG8 496 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 PCDHA1Q9Y5I3 950 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 POTEMA6NI47 508 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 LAD1O00515 517 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
RTN3-203ENST00000341307 PRCPP42785 496 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 RCN1Q15293 331 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 CCDC6Q16204 474 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 TMEM259Q4ZIN3 620 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 RFWD3Q6PCD5 774 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
RTN3-203ENST00000341307 DYDC2Q96IM9 177 aa12.62□□□□□ -0.39
RTN3-203ENST00000341307 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CDK4P11802 303 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 NFKBIAP25963 317 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 GRIA2P42262 883 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 HALP42357 657 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 AP1B1Q10567 949 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 BCL2A1Q16548 175 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CALCRLQ16602 461 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CFAP157Q5JU67 520 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 GRAMD4Q6IC98 578 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CCDC84Q86UT8 332 aaPredicted RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 KIAA1683Q9H0B3 1180 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 RGS16O15492 202 aaPredicted RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 KRT36O76013 467 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 AGTP01019 485 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 T-ENOLP0DO92 83 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 EHHADHQ08426 723 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 TREML1Q86YW5 311 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 ZNF184Q99676 751 aaPredicted RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 DDX47Q9H0S4 455 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 RPL26L1Q9UNX3 145 aaKnown RBP12.61□□□□□ -0.39
RTN3-203ENST00000341307 ZNF148Q9UQR1 794 aa12.61□□□□□ -0.39
RTN3-203ENST00000341307 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 BIRC5O15392 142 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 TBX10O75333 385 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 ATP5HO75947 161 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 OR6B1O95007 311 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 GSTT2P0CG29 244 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 GSTT2BP0CG30 244 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 TRPC1P48995 793 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
RTN3-203ENST00000341307 TNFAIP8L3Q5GJ75 292 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 UBAP2Q5T6F2 1119 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 ZNF658Q5TYW1 1059 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 GPC2Q8N158 579 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 FAM133AQ8N9E0 248 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 DQX1Q8TE96 717 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 TUT1Q9H6E5 874 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 TUBA8Q9NY65 449 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 IL1RAPL1Q9NZN1 696 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 COL6A2P12110 1019 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 GFPT1Q06210 699 aaPredicted RBP12.6□□□□□ -0.39
RTN3-203ENST00000341307 SLC34A1Q06495 639 aa12.6□□□□□ -0.39
RTN3-203ENST00000341307 ACVR2BQ13705 512 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms