RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 IGLV3-22A0A075B6J6 115 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 CCL15-CCL14A0A0B4J2E2 113 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 TBC1D8O95759 1140 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 PSMA2P25787 234 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 EPHX2P34913 555 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 CCL15Q16663 113 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 WDR49Q8IV35 697 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 EFCAB13Q8IY85 973 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 NDUFAF2Q8N183 169 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 GOLGA8SH3BPF8 625 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 NCK2O43639 380 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 ITGB5P18084 799 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 DMTNQ08495 405 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 HHATQ5VTY9 493 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 KLRG1Q96E93 195 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 HEXIM2Q96MH2 286 aaKnown RBP8.08□□□□□ -1.12
HIPK1-201ENST00000340480 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 CBWD1Q9BRT8 395 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 KIF9Q9HAQ2 790 aa8.08□□□□□ -1.12
HIPK1-201ENST00000340480 CENPCQ03188 943 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PIGHQ14442 188 aaPredicted RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PSMD6Q15008 389 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 UAP1Q16222 522 aaPredicted RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 OR6B2Q6IFH4 312 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 GLI3P10071 1580 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 UNCXA6NJT0 531 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 DPYSL4O14531 572 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 NR1D1P20393 614 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CUL2Q13617 745 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 RFX6Q8HWS3 928 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 C10orf67Q8IYJ2 551 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ATP2A3Q93084 1043 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 AP1M1Q9BXS5 423 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 LRRC4Q9HBW1 653 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ASTN1O14525 1302 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 MFSD14CQ5VZR4 134 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CENPUQ71F23 418 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 RCOR2Q8IZ40 523 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PDIK1LQ8N165 341 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 TNIP3Q96KP6 325 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 TRIM56Q9BRZ2 755 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 TARS2Q9BW92 718 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 HSD3B7Q9H2F3 369 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CYP3A43Q9HB55 503 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PPANQ9NQ55 473 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PSD3Q9NYI0 1048 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ATP8A1Q9Y2Q0 1164 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 RASGRF2O14827 1237 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 HUS1O60921 280 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CD4P01730 458 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 STX2P32856 288 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PNPLA4P41247 253 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 PCBP1Q15365 356 aaKnown RBP eCLIP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 MEI1Q5TIA1 1274 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ACAD10Q6JQN1 1059 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CBWD2Q8IUF1 395 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CACNA2D3Q8IZS8 1091 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 OR6J1Q8NGC5 347 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 BAP1Q92560 729 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ISCUQ9H1K1 167 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 GANQ9H2C0 597 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 BCAP29Q9UHQ4 241 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 MAST2Q6P0Q8 1798 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 BTAF1O14981 1849 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CFAP69A5D8W1 941 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 SDC4P31431 198 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ATICP31939 592 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ITKQ08881 620 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 DGKDQ16760 1214 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ARHGEF18Q6ZSZ5 1173 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 BCAS4Q8TDM0 211 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 DDX47Q9H0S4 455 aaKnown RBP8.07□□□□□ -1.12
HIPK1-201ENST00000340480 STAP1Q9ULZ2 295 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 TTLL3Q9Y4R7 772 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 ALG6Q9Y672 507 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 CAPN6Q9Y6Q1 641 aa8.07□□□□□ -1.12
HIPK1-201ENST00000340480 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 ADCY3O60266 1144 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 SH2D4BQ5SQS7 431 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 TRIM42Q8IWZ5 723 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 CDKL2Q92772 493 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
HIPK1-201ENST00000340480 ADAM21Q9UKJ8 722 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 NRAPQ86VF7 1730 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 RBAK-RBAKDNI3L0D1 243 aa8.06□□□□□ -1.12
HIPK1-201ENST00000340480 FOXN3O00409 490 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms