RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 SLC30A5Q8TAD4 765 aa7.74□□□□□ -1.17
NUP43-201ENST00000340413 HELQQ8TDG4 1101 aa7.74□□□□□ -1.17
NUP43-201ENST00000340413 NHEJ1Q9H9Q4 299 aaPredicted RBP7.74□□□□□ -1.17
NUP43-201ENST00000340413 DNAJC12Q9UKB3 198 aa7.74□□□□□ -1.17
NUP43-201ENST00000340413 CITO14578 2027 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 OFD1O75665 1012 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 SRGAP2CP0DJJ0 459 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 SPA17Q15506 151 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 GJC2Q5T442 439 aaPredicted RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 PPP1R13BQ96KQ4 1090 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 CCDC42Q96M95 316 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 NLRP4Q96MN2 994 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 SPAG5Q96R06 1193 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 KIFC3Q9BVG8 833 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 GPR88Q9GZN0 384 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 CYLDQ9NQC7 956 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 UBQLN1Q9UMX0 589 aaKnown RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 EOMESO95936 686 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 STAG3L1P0CL83 205 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 PRLRP16471 622 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 HOXA11P31270 313 aaPredicted RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 NAB2Q15742 525 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 ENOX2Q16206 610 aaKnown RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 ZNF560Q96MR9 790 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 PYCARDQ9ULZ3 195 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 KRT86O43790 486 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 EDN1P05305 212 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 RPL9P32969 192 aaKnown RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 POLR2FP61218 127 aaKnown RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 RBP5P82980 135 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 RRAGAQ7L523 313 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 CATSPER4Q7RTX7 472 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 BEST2Q8NFU1 509 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 TRAPPC12Q8WVT3 735 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 OXCT2Q9BYC2 517 aaPredicted RBP7.73□□□□□ -1.17
NUP43-201ENST00000340413 NIF3L1Q9GZT8 377 aa7.73□□□□□ -1.17
NUP43-201ENST00000340413 A0A1W2PQ45 241 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 A0A1W2PQY0 241 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 HLA-DRAP01903 254 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 CDH5P33151 784 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 ADKP55263 362 aaKnown RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 SOX10P56693 466 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 FAM189BP81408 668 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 INCA1Q0VD86 236 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 UBXN11Q5T124 520 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TDRD10Q5VZ19 366 aaKnown RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 GDF6Q6KF10 455 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 UNC93AQ86WB7 457 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 KSR1Q8IVT5 923 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 CXorf38Q8TB03 319 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 PCIF1Q9H4Z3 704 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 GDAP2Q9NXN4 497 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 PCDHGC3Q9UN70 934 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 MYADML2A6NDP7 307 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 PES1O00541 588 aaKnown RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 TREHO43280 583 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 SLC9A1P19634 815 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 PIK3CAP42336 1068 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TSC2P49815 1807 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 KIF11P52732 1056 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 COL4A4P53420 1690 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 KLHL30Q0D2K2 578 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 CUL2Q13617 745 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TMEM132DQ14C87 1099 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 FBXO47Q5MNV8 452 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 MIS12Q9H081 205 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 MINDY3Q9H8M7 445 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 ARHGAP20Q9P2F6 1191 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 STK39Q9UEW8 545 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 FHOD1Q9Y613 1164 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 PTCH2Q9Y6C5 1203 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 CDY2AQ9Y6F7 541 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 GRIN2DO15399 1336 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 UMODL1Q5DID0 1318 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 HOXA2O43364 376 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 EFCAB14O75071 495 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TACC1O75410 805 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 VNN1O95497 513 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TMEM191BP0C7N4 346 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 BEX3Q00994 111 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 DRAP1Q14919 205 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 PTGISQ16647 500 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 RAD9BQ6WBX8 426 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TRAPPC11Q7Z392 1133 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 ZNF516Q92618 1163 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 SAAL1Q96ER3 474 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 DDX27Q96GQ7 796 aaKnown RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 ISCUQ9H1K1 167 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 FAM207AQ9NSI2 230 aaPredicted RBP7.72□□□□□ -1.17
NUP43-201ENST00000340413 PCDHB2Q9Y5E7 798 aa7.72□□□□□ -1.17
NUP43-201ENST00000340413 TMEM189-UBE2V1I3L0A0 370 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 CXCL10P02778 98 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 TMEM253P0C7T8 217 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 SETSIPP0DME0 302 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 MATR3P43243 847 aaKnown RBP eCLIP7.71□□□□□ -1.17
NUP43-201ENST00000340413 C1QTNF8P60827 252 aa7.71□□□□□ -1.17
NUP43-201ENST00000340413 IGBP1P78318 339 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms