RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NEUROG2Q9H2A3 272 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TUFT1Q9NNX1 390 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 GDF3Q9NR23 364 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 KCNG1Q9UIX4 513 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ABT1Q9ULW3 272 aaKnown RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 MYH13Q9UKX3 1938 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 COL4A1P02462 1669 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 A0A1W2PQJ5 194 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CCDC160A6NGH7 325 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TRAPPC3O43617 180 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ATP6V1G2O95670 118 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 NT5C2P49902 561 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 GEN1Q17RS7 908 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SMTNL2Q2TAL5 461 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 AADACL2Q6P093 401 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CCDC137Q6PK04 289 aaKnown RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 KAT5Q92993 513 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TSNARE1Q96NA8 513 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TMEM117Q9H0C3 514 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ABCF3Q9NUQ8 709 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SIK3Q9Y2K2 1263 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ALG6Q9Y672 507 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 URB1O60287 2271 aaKnown RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 FOXO6A8MYZ6 492 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PLSCR1O15162 318 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SPAG7O75391 227 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SLC4A1P02730 911 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PDGFRBP09619 1106 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PLS3P13797 630 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ALDH3A1P30838 453 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SFNP31947 248 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CIITAP33076 1130 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ACTR2P61160 394 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 KCNJ2P63252 427 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ITIH3Q06033 890 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 AMHR2Q16671 573 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SPRED3Q2MJR0 410 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 MEI1Q5TIA1 1274 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TWF2Q6IBS0 349 aaKnown RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ZNF571Q7Z3V5 609 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 RHOT2Q8IXI1 618 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 IL31RAQ8NI17 732 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SYTL5Q8TDW5 730 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SLC20A1Q8WUM9 679 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TRAPPC12Q8WVT3 735 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 LPAR1Q92633 364 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 C9orf72Q96LT7 481 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 FBXO40Q9UH90 709 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SGPL1O95470 568 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ICAM1P05362 532 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 CTSHP09668 335 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 HSPA9P38646 679 aaKnown RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 CLCN3P51790 818 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ITKQ08881 620 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 CLUL1Q15846 466 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 EDRF1Q3B7T1 1238 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 GLRA4Q5JXX5 417 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 DARS2Q6PI48 645 aaKnown RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 GPD1LQ8N335 351 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 TAS1R2Q8TE23 839 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 RFFLQ8WZ73 363 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 RILPQ96NA2 401 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 OSBPL1AQ9BXW6 950 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 STK33Q9BYT3 514 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MRPL47Q9HD33 250 aaKnown RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 SMYD2Q9NRG4 433 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ASTN2O75129 1339 aaPredicted RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 PITPNM2Q9BZ72 1349 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MYH3P11055 1940 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 TBX3O15119 743 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ATP9AO75110 1047 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 DGAT1O75907 488 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 BRAFP15056 766 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 COMTP21964 271 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 SMARCA1P28370 1054 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MSH2P43246 934 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 NPTX2P47972 431 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 RAD23BP54727 409 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 PSMC1P62191 440 aaKnown RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ELF3P78545 371 aaPredicted RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ORC2Q13416 577 aaPredicted RBP6.87□□□□□ -1.31
HMG20A-201ENST00000336216 DRP2Q13474 957 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 C6orf118Q5T5N4 469 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 OTOP1Q7RTM1 612 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ZNF720Q7Z2F6 126 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 ATG4AQ8WYN0 398 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MTMR9Q96QG7 549 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 RPS6KC1Q96S38 1066 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 MMP19Q99542 508 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 PDCD2LQ9BRP1 358 aa6.87□□□□□ -1.31
HMG20A-201ENST00000336216 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms