RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 DHX38Q92620 1227 aaKnown RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 SYN2Q92777 582 aaPredicted RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 FDXACB1Q9BRP7 624 aaPredicted RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 RNF208Q9H0X6 261 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 DHX35Q9H5Z1 703 aaKnown RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 FZD1Q9UP38 647 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 CARNS1A5YM72 827 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 FKTNO75072 461 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 GNL1P36915 607 aaPredicted RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 ITPRIPL1Q6GPH6 555 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 SCYL1Q96KG9 808 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 SETD4Q9NVD3 440 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 DPP3Q9NY33 737 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 H7C4K7 107 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 SLITRK3O94933 977 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 CAV1Q03135 178 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 KIAA1755Q5JYT7 1200 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 FMO2Q99518 471 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.51
POLR1B-202ENST00000333990 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 VTNP04004 478 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ITGB3P05106 788 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 THP07101 528 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 PDGFRBP09619 1106 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 MCF2P10911 925 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 LCP1P13796 627 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 RAG1P15918 1043 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 SLC9A1P19634 815 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CDKL3Q8IVW4 592 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 MID2Q9UJV3 735 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 HEY1Q9Y5J3 304 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 NFASCO94856 1347 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 NFKBIEO00221 500 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CREB3O43889 395 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ZNF286BP0CG31 522 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 PDGFRAP16234 1089 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 PAMP19021 973 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 EFHC1Q5JVL4 640 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 KSR1Q8IVT5 923 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 DSEQ9UL01 958 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 UBIAD1Q9Y5Z9 338 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 FHOD1Q9Y613 1164 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 POC1B-GALNT4F8VUJ3 575 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 BNIP3LO60238 219 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 UBA1P22314 1058 aaKnown RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 MSH2P43246 934 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CDH6P55285 790 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 NME3Q13232 169 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 PIGHQ14442 188 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 KLHDC7AQ5VTJ3 777 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CYP4F22Q6NT55 531 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 GPR142Q7Z601 462 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 SKA2Q8WVK7 121 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 ZNF512Q96ME7 567 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-202ENST00000333990 OSMRQ99650 979 aa11.89□□□□□ -0.51
POLR1B-202ENST00000333990 CYP3A7-CYP3A51PA0A087WV96 503 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 FAM200BP0CF97 657 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 CYP3A7P24462 503 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
POLR1B-202ENST00000333990 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.88□□□□□ -0.51
POLR1B-202ENST00000333990 GANCQ8TET4 914 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 TLK1Q9UKI8 766 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 ATP11BQ9Y2G3 1177 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 GRID2IPA4D2P6 1211 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 MEIS2O14770 477 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 ATICP31939 592 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 TMEM119Q4V9L6 283 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 CELF3Q5SZQ8 465 aaKnown RBP11.88□□□□□ -0.51
POLR1B-202ENST00000333990 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
POLR1B-202ENST00000333990 IL17RAQ96F46 866 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms