RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RAB21Q9UL25 225 aa18.24■□□□□ 0.51
DDX41-201ENST00000330503 TNFSF13BQ9Y275 285 aa18.24■□□□□ 0.51
DDX41-201ENST00000330503 CST3P01034 146 aaPredicted RBP18.23■□□□□ 0.51
DDX41-201ENST00000330503 VTNP04004 478 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 GZMAP12544 262 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 ACO1P21399 889 aaKnown RBP18.23■□□□□ 0.51
DDX41-201ENST00000330503 PHKA2P46019 1235 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 CDR2Q01850 454 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 WDR49Q8IV35 697 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 MS4A14Q96JA4 679 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 CDT1Q9H211 546 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 GJD2Q9UKL4 321 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 COG5Q9UP83 839 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 AKT3Q9Y243 479 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 NUB1Q9Y5A7 615 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 A6NJR5 290 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
DDX41-201ENST00000330503 KRT5P13647 590 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 AP3M2P53677 418 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 OLFML2BQ68BL8 750 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 THNSL1Q8IYQ7 743 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 KIAA0319LQ8IZA0 1049 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 CEP120Q8N960 986 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 LMBR1Q8WVP7 490 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 PRMT7Q9NVM4 692 aaPredicted RBP18.23■□□□□ 0.51
DDX41-201ENST00000330503 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
DDX41-201ENST00000330503 GPR25O00155 361 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 KIF4AO95239 1232 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 IGHA2P01877 340 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 TMOD1P28289 359 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 CYP2C19P33261 490 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 DNA2P51530 1060 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 IRX5P78411 483 aaPredicted RBP18.22■□□□□ 0.51
DDX41-201ENST00000330503 ITIH3Q06033 890 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 CUL2Q13617 745 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 NCOA4Q13772 614 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 TCEAL1Q15170 157 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 ZNF568Q3ZCX4 644 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 FAM212AQ96EL1 285 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 ARGLU1Q9NWB6 273 aaPredicted RBP18.22■□□□□ 0.51
DDX41-201ENST00000330503 ZSWIM8A7E2V4 1837 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 BUB1BO60566 1050 aaPredicted RBP18.22■□□□□ 0.51
DDX41-201ENST00000330503 PHACTR2O75167 634 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 ZRANB2O95218 330 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX41-201ENST00000330503 CLTAP09496 248 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 INHBEP58166 350 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 IRF5Q13568 498 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 NT5DC3Q86UY8 548 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 SPATA4Q8NEY3 305 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 KAT2BQ92831 832 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
DDX41-201ENST00000330503 SEC31AO94979 1220 aaKnown RBP18.21■□□□□ 0.51
DDX41-201ENST00000330503 CYP2B6P20813 491 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 PDE6CP51160 858 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 OSTNP61366 133 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 GPC5P78333 572 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 SURF1Q15526 300 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 PTPROQ16827 1216 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 MMGT1Q8N4V1 131 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
DDX41-201ENST00000330503 MTMR12Q9C0I1 747 aa18.21■□□□□ 0.51
DDX41-201ENST00000330503 MEFVO15553 781 aaPredicted RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 NOP14P78316 857 aaKnown RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 BRD3Q15059 726 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 DUOXA2Q1HG44 320 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CC2D1AQ6P1N0 951 aaPredicted RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 DAAM2Q86T65 1068 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 RNF14Q9UBS8 474 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CNTN6Q9UQ52 1028 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 B4GALT4O60513 344 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 ASS1P00966 412 aaKnown RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 HADHBP55084 474 aaKnown RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 TMEM132AQ24JP5 1023 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 TMCO3Q6UWJ1 677 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 PEX26Q7Z412 305 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 PPP1R13LQ8WUF5 828 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CPB2Q96IY4 423 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CCDC94Q9BW85 323 aaPredicted RBP18.2■□□□□ 0.5
DDX41-201ENST00000330503 PDZD7Q9H5P4 517 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
DDX41-201ENST00000330503 CES2O00748 559 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 CTGFP29279 349 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 PAFAH1B1P43034 410 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 MYL6P60660 151 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 VSNL1P62760 191 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 CLEC16AQ2KHT3 1053 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 CCDC181Q5TID7 509 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 SYCE1Q8N0S2 351 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 UBR7Q8N806 425 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 ZIC5Q96T25 663 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 PCDHB2Q9Y5E7 798 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 TLL2Q9Y6L7 1015 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms