RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SP110Q9HB58 689 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 PARP4Q9UKK3 1724 aaKnown RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 CYP26A1O43174 497 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 NR1D1P20393 614 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 DMTNQ08495 405 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 DBN1Q16643 649 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SYTL5Q8TDW5 730 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 ACTR5Q9H9F9 607 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-201ENST00000328300 EFCC1Q9HA90 598 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 MRFAP1Q9Y605 127 aa12.08□□□□□ -0.48
COL4A5-201ENST00000328300 SPAG6O75602 509 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 TTC4O95801 387 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 CENPCQ03188 943 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SPARCL1Q14515 664 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 PASD1Q8IV76 773 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 ZWINTO95229 277 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 KRT14P02533 472 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 AXLP30530 894 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 ATP1A2P50993 1020 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 NOP14P78316 857 aaKnown RBP12.07□□□□□ -0.48
COL4A5-201ENST00000328300 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A5-201ENST00000328300 PPIL2Q13356 520 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 MPZL3Q6UWV2 235 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SKA2Q8WVK7 121 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-201ENST00000328300 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 E2F5Q15329 346 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
COL4A5-201ENST00000328300 ADGRA1Q86SQ6 560 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 PLA2G6O60733 806 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 TADA2AO75478 443 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 CYP3A43Q9HB55 503 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SNX12Q9UMY4 172 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SETSIPP0DME0 302 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SLC2A3P11169 496 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 MMEL1Q495T6 779 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SPOPLQ6IQ16 392 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SDCCAG3Q96C92 435 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 CGRRF1Q99675 332 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SPATC1LQ9H0A9 340 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 NSMCE4AQ9NXX6 385 aa12.07□□□□□ -0.48
COL4A5-201ENST00000328300 SLC37A4O43826 429 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 ODC1P11926 461 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PAX3P23760 479 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 GCKP35557 465 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 NPEPPSP55786 919 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PPARDQ03181 441 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 CRY2Q49AN0 593 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 EPS15L1Q9UBC2 864 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 COPEO14579 308 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 CLCN6P51797 869 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PMS2P54278 862 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 ILF2Q12905 390 aaKnown RBP12.06□□□□□ -0.48
COL4A5-201ENST00000328300 RANBP17Q9H2T7 1088 aaKnown RBP12.06□□□□□ -0.48
COL4A5-201ENST00000328300 RSAD1Q9HA92 442 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 ABCB6Q9NP58 842 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 SAT1P21673 171 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 STAT4Q14765 748 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.484e-6■■■■■ 41.5
COL4A5-201ENST00000328300 TRIM59Q8IWR1 403 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 SLC5A5Q92911 643 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 MRPL40Q9NQ50 206 aaKnown RBP12.06□□□□□ -0.48
COL4A5-201ENST00000328300 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 NFU1Q9UMS0 254 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 CHGBP05060 677 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 DDX5P17844 614 aaKnown RBP12.06□□□□□ -0.48
COL4A5-201ENST00000328300 GTF3C4Q9UKN8 822 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 VWA5AO00534 786 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PHF2O75151 1096 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 TOM1L1O75674 476 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 CDH6P55285 790 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 LRGUKQ96M69 825 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 MRGBPQ9NV56 204 aa12.06□□□□□ -0.48
COL4A5-201ENST00000328300 MORC2Q9Y6X9 1032 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-201ENST00000328300 ARHGAP42A6NI28 874 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ATP5HO75947 161 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 SULT1E1P49888 294 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TPI1P60174 286 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 PGM5Q15124 567 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 PKN1Q16512 942 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 JADE1Q6IE81 842 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 CCDC137Q6PK04 289 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 MTHFD1LQ6UB35 978 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 DHX35Q9H5Z1 703 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 GOLGA8MH3BSY2 632 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 WNT10BO00744 389 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms