RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 RASAL3Q86YV0 1011 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 SPATA4Q8NEY3 305 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 GPR20Q99678 358 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 SNX12Q9UMY4 172 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 SLC16A3O15427 465 aaKnown RBP14.05□□□□□ -0.16
LIN28A-202ENST00000326279 CTNNA1P35221 906 aaKnown RBP14.05□□□□□ -0.16
LIN28A-202ENST00000326279 ADCY8P40145 1251 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 PSEN2P49810 448 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 CASP8Q14790 479 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 ABHD15Q6UXT9 468 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 IPO4Q8TEX9 1081 aaKnown RBP14.05□□□□□ -0.16
LIN28A-202ENST00000326279 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 EDEM3Q9BZQ6 932 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 OLFML3Q9NRN5 406 aa14.05□□□□□ -0.16
LIN28A-202ENST00000326279 SSU72P8A0A1W2PR75 194 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 A8MXQ7 604 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 GUCY2CP25092 1073 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CACNB2Q08289 660 aaPredicted RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 TRIM32Q13049 653 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CBWD6Q4V339 395 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CBWD3Q5JTY5 395 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CBWD5Q5RIA9 395 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CC2D1AQ6P1N0 951 aaPredicted RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 RDM1Q8NG50 284 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 KATNAL1Q9BW62 490 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 NAGPAQ9UK23 515 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 ATP8A1Q9Y2Q0 1164 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 NKRFO15226 690 aaKnown RBP eCLIP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 TREHO43280 583 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 DAPK3O43293 454 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 POLR2BP30876 1174 aaKnown RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 GPC5P78333 572 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 EEF1DP3Q658K8 133 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 RSRC2Q7L4I2 434 aaKnown RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 ZNF571Q7Z3V5 609 aaPredicted RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.04□□□□□ -0.16
LIN28A-202ENST00000326279 SLC35G2Q8TBE7 412 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 SOCS4Q8WXH5 440 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 TNFSF9P41273 254 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 WDR59Q6PJI9 974 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 SV2AQ7L0J3 742 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 ZNF507Q8TCN5 953 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 TATDN2Q93075 761 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 FAN1Q9Y2M0 1017 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
LIN28A-202ENST00000326279 CA12O43570 354 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 CDH8P55286 799 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 CAPSQ13938 189 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 DNAJC24Q6P3W2 148 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 AFAP1L1Q8TED9 768 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 NGRNQ9NPE2 291 aaKnown RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 SCN9AQ15858 1988 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 RCCD1A6NED2 376 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 B3GAT3O94766 335 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 GNA15P30679 374 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 NAMPTP43490 491 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 ADCY1Q08828 1119 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 NIPA1Q7RTP0 329 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 TEX2Q8IWB9 1127 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 APBA2Q99767 749 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 PRMT7Q9NVM4 692 aaPredicted RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 AMACRQ9UHK6 382 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 DDX60Q8IY21 1712 aaKnown RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 CASTOR2A6NHX0 329 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 HUS1O60921 280 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 OR1G1P47890 313 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 TMEM132DQ14C87 1099 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 BTBD6Q96KE9 485 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 CALN1Q9BXU9 219 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 KLHL11Q9NVR0 708 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 SNX24Q9Y343 169 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
LIN28A-202ENST00000326279 MRPL42Q9Y6G3 142 aaKnown RBP14.03□□□□□ -0.16
LIN28A-202ENST00000326279 FRMPD4Q14CM0 1322 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 LRRD1A4D1F6 860 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 XPOTO43592 962 aaKnown RBP14.02□□□□□ -0.16
LIN28A-202ENST00000326279 TOM1L1O75674 476 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 NOP14P78316 857 aaKnown RBP14.02□□□□□ -0.16
LIN28A-202ENST00000326279 RNF10Q8N5U6 811 aaKnown RBP14.02□□□□□ -0.16
LIN28A-202ENST00000326279 ZNF564Q8TBZ8 553 aaPredicted RBP14.02□□□□□ -0.16
LIN28A-202ENST00000326279 SLC20A1Q8WUM9 679 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 LRRC45Q96CN5 670 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 OSGEPQ9NPF4 335 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 PCSK1NQ9UHG2 260 aa14.02□□□□□ -0.16
LIN28A-202ENST00000326279 TRAF3IP3Q9Y228 551 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms