RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NR5A1Q13285 461 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MEA1Q16626 185 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SRPK1Q96SB4 655 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TBCBQ99426 244 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 PAGR1Q9BTK6 254 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 C15orf38-AP3S2A0A0A6YYH1 394 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 PNPLA4P41247 253 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ACTN3Q08043 901 aaPredicted RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ARPINQ7Z6K5 226 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 FETUBQ9UGM5 382 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 RBM47A0AV96 593 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 USP17L3A6NCW0 530 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 USP17L4A6NCW7 530 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SLC2A3P11169 496 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 DSG1Q02413 1049 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF746Q6NUN9 644 aaPredicted RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 USP17L1Q7RTZ2 530 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 RFX6Q8HWS3 928 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ASAP3Q8TDY4 903 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 PUS7LQ9H0K6 701 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MUC13Q9H3R2 512 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 NUP205Q92621 2012 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MAPRE1Q15691 268 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CHRNA2Q15822 529 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 BOLA3Q53S33 107 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CDK5RAP1Q96SZ6 601 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TRIM54Q9BYV2 358 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 STK32BQ9NY57 414 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 APPL1Q9UKG1 709 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SOX13Q9UN79 622 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 HSPA4LO95757 839 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 BAG2O95816 211 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 PTGISQ16647 500 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MGARPQ8TDB4 240 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CPSF3Q9UKF6 684 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CLDN3O15551 220 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 OATP04181 439 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CCR3P51677 355 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 HEATR6Q6AI08 1181 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 NSUN6Q8TEA1 469 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 DPH5Q9H2P9 285 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LRRC4Q9HBW1 653 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 VTI1BQ9UEU0 232 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 L3MBTL1Q9Y468 752 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 UCHL3P15374 230 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 RAPH1Q70E73 1250 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CATSPER2Q96P56 530 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 NMRK1Q9NWW6 199 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF638Q14966 1978 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 H3BRJ5 948 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CCDC130P13994 396 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 FKBP1AP62942 108 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CSTF3Q12996 717 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 NUDCD3Q8IVD9 361 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 NELFCDQ8IXH7 590 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CHMP2AO43633 222 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 A1BGP04217 495 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PMLP29590 882 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SDC4P31431 198 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PTENP60484 403 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 C16orf87Q6PH81 154 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LRRC6Q86X45 466 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 STX19Q8N4C7 294 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 DNAJC9Q8WXX5 260 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 BTBD6Q96KE9 485 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 AGPAT1Q99943 283 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 TUBA8Q9NY65 449 aaPredicted RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SLC9A2Q9UBY0 812 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 RSL24D1Q9UHA3 163 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 BCAMP50895 628 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 DDR1Q08345 913 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 EFTUD2Q15029 972 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SIX6OS1Q8N1H7 587 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 KCNF1Q9H3M0 494 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 DIABLOQ9NR28 239 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 POC1B-GALNT4F8VUJ3 575 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 SNRPAP09012 282 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LAMC2Q13753 1193 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PPIL6Q8IXY8 311 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 MAML1Q92585 1016 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PSMB7Q99436 277 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 MLXIPQ9HAP2 919 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 TTC7AQ9ULT0 858 aaPredicted RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 CNTNAP4Q9C0A0 1308 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ITGB4P16144 1822 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ATAD5Q96QE3 1844 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LOC102724159A0A0B4J2E5 919 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LRRIQ4A6NIV6 560 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms