RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ARSEP51690 589 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 CASP10Q92851 521 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 SERPINB12Q96P63 405 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 CD58P19256 250 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 HADHAP40939 763 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 COPAP53621 1224 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 H2AFY2Q9P0M6 372 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 GLI2P10070 1586 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 ACTR2P61160 394 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 TRIP4Q15650 581 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 LCORLQ8N3X6 602 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 CYFIP2Q96F07 1278 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 NSL1Q96IY1 281 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PDXKO00764 312 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 ATP1A3P13637 1013 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 TTC33Q6PID6 262 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 ZNF677Q86XU0 584 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 UBA2Q9UBT2 640 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 FBXO2Q9UK22 296 aaPredicted RBP11.86□□□□□ -0.51
GCN1-201ENST00000300648 HEY1Q9Y5J3 304 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 PXDNLA1KZ92 1463 aa11.86□□□□□ -0.51
GCN1-201ENST00000300648 LONP2Q86WA8 852 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 STK33Q9BYT3 514 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 PCDHB6Q9Y5E3 794 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 USP11P51784 963 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 EFNA5P52803 228 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 MEI1Q5TIA1 1274 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 ANKRD7Q92527 254 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SH3GL1Q99961 368 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 DCLRE1BQ9H816 532 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SLC4A1P02730 911 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SPRP35270 261 aaPredicted RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 LRRC41Q15345 812 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 KYNUQ16719 465 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 P3H2Q8IVL5 708 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 GRID1Q9ULK0 1009 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SOX13Q9UN79 622 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 NPEPPSP55786 919 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 COASYQ13057 564 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 LINC00523Q86TU6 105 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 ZSCAN32Q9NX65 697 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 MAGI3Q5TCQ9 1506 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 PNMA8CA0A1B0GUJ8 204 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 HMOX2P30519 316 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 NCF4Q15080 339 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SENP7Q9BQF6 1050 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 CHMP2BQ9UQN3 213 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 TBKBP1A7MCY6 615 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 A1BGP04217 495 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 CHN1P15882 459 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 CCDC142Q17RM4 750 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 ZFP42Q96MM3 310 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 MRPL4Q9BYD3 311 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 A0A1B0GTH6 734 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 NCAPHQ15003 741 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 DHX40Q8IX18 779 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 RFWD2Q8NHY2 731 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 SCFD2Q8WU76 684 aa11.85□□□□□ -0.51
GCN1-201ENST00000300648 POP5Q969H6 163 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
GCN1-201ENST00000300648 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.85□□□□□ -0.51
GCN1-201ENST00000300648 GYG1P46976 350 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 RGS4P49798 205 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 GPC3P51654 580 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 XPO6Q96QU8 1125 aaKnown RBP11.84□□□□□ -0.51
GCN1-201ENST00000300648 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.515e-6■■■□□ 17.2
GCN1-201ENST00000300648 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
GCN1-201ENST00000300648 PDIA5Q14554 519 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 TRIP10Q15642 601 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 CROCCP3Q8IVE0 287 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
GCN1-201ENST00000300648 KDSRQ06136 332 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 TAB1Q15750 504 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 CDO1Q16878 200 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 ABCB11O95342 1321 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 EVPLLA8MZ36 301 aa11.84□□□□□ -0.51
GCN1-201ENST00000300648 ENO1P06733 434 aaKnown RBP11.84□□□□□ -0.51
GCN1-201ENST00000300648 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms