RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 MSH4O15457 936 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 OPHN1O60890 802 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 FESP07332 822 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CETPP11597 493 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 BMP3P12645 472 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 RRM1P23921 792 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CNGA1P29973 690 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 RPA3P35244 121 aaPredicted RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 SKIV2L2P42285 1042 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CUL3Q13618 768 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 RASA3Q14644 834 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 KHDC1Q4VXA5 237 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 TAF1P21675 1872 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 KRT36O76013 467 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CHRNB2P17787 502 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 PTPN4P29074 926 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 MFAP3P55082 362 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 MDH1BQ5I0G3 518 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 GGA1Q9UJY5 639 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 TXNDC9O14530 226 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CCNB1P14635 433 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 KRT4P19013 534 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 SP100P23497 879 aaPredicted RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CAV1Q03135 178 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 KPNB1Q14974 876 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 PARP6Q2NL67 630 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 RFWD3Q6PCD5 774 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CPA5Q8WXQ8 436 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 LARSQ9P2J5 1176 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 HEY2Q9UBP5 337 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 A6NHS1 94 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CCDC22O60826 627 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 GM2AP17900 193 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CACNB3P54284 484 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 GPS1Q13098 491 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CGB2Q6NT52 195 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 DPY19L2P1Q6NXN4 242 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 FAM43BQ6ZT52 329 aaPredicted RBP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRUB1-201ENST00000298746 MAML1Q92585 1016 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 TTC17Q96AE7 1141 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 ANKRD27Q96NW4 1050 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 MKNK1Q9BUB5 465 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 TRIM55Q9BYV6 548 aa12.11□□□□□ -0.47
TRUB1-201ENST00000298746 CIB2O75838 187 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 POLD1P28340 1107 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 RAB27AP51159 221 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 ARFIP2P53365 341 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 KIF22Q14807 665 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 DSTYKQ6XUX3 929 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 ASAP3Q8TDY4 903 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
TRUB1-201ENST00000298746 LRRC42Q9Y546 428 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 ZBED4O75132 1171 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 WFS1O76024 890 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
TRUB1-201ENST00000298746 PPP3CAQ08209 521 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
TRUB1-201ENST00000298746 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
TRUB1-201ENST00000298746 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 C12orf65Q9H3J6 166 aaKnown RBP12.1□□□□□ -0.47
TRUB1-201ENST00000298746 LRRC19Q9H756 370 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 LRCH1Q9Y2L9 728 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms