RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TRIM6Q9C030 488 aaPredicted RBP26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 NXF3Q9H4D5 531 aaKnown RBP26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 AJAP1Q9UKB5 411 aaPredicted RBP26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 RALGAPA2Q2PPJ7 1873 aa26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 SELPP16109 830 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 PAK2Q13177 524 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 BFSP2Q13515 415 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 TWF2Q6IBS0 349 aaKnown RBP26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 IQCEQ6IPM2 695 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 PDXDC1Q6P996 788 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 GJB7Q6PEY0 223 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 RRAGAQ7L523 313 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 TRAPPC11Q7Z392 1133 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 IPPQ9Y573 584 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 PITPNM1O00562 1244 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 JAM2P57087 298 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 MEA1Q16626 185 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 NT5DC4Q86YG4 428 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 SYN2Q92777 582 aaPredicted RBP26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 MTMR12Q9C0I1 747 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 NUCKS1Q9H1E3 243 aaKnown RBP26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 MYO6Q9UM54 1294 aa26.6■■□□□ 1.85
GTF2A1-201ENST00000298173 LRRC53A6NM62 1247 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 TLR3O15455 904 aaKnown RBP26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 PQBP1O60828 265 aaKnown RBP26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 ZC3H11AO75152 810 aaKnown RBP eCLIP26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 HLA-DRAP01903 254 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 RFX1P22670 979 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 XKR4Q5GH76 650 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 SCARA3Q6AZY7 606 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 JADE1Q6IE81 842 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 LRRC8DQ7L1W4 858 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 SNX27Q96L92 541 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 RNF39Q9H2S5 420 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 DNAJC12Q9UKB3 198 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 PYCARDQ9ULZ3 195 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 C2CD2Q9Y426 696 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 PCDHB2Q9Y5E7 798 aa26.59■■□□□ 1.85
GTF2A1-201ENST00000298173 CST3P01034 146 aaPredicted RBP26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 NFICP08651 508 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 ZSCAN20P17040 1043 aaPredicted RBP26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 TFAMQ00059 246 aaKnown RBP26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 FAAP100Q0VG06 881 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 BIRC3Q13489 604 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 GPNMBQ14956 572 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 E4F1Q66K89 784 aaPredicted RBP26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 ZSCAN30Q86W11 494 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 STK33Q9BYT3 514 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 CXCL16Q9H2A7 254 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 FAM105AQ9NUU6 356 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 AIPL1Q9NZN9 384 aa26.58■■□□□ 1.85
GTF2A1-201ENST00000298173 PDCD11Q14690 1871 aaKnown RBP26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 MGEA5O60502 916 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 RECQL4O94761 1208 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 CDK17Q00537 523 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 ZBTB6Q15916 424 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 ARHGEF19Q8IW93 802 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 CXorf38Q8TB03 319 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 HELQQ8TDG4 1101 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 ANKRD36BP1Q96IX9 119 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 DERAQ9Y315 318 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 ZNF623O75123 536 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 AKAP5P24588 427 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 YARSP54577 528 aaKnown RBP26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 TLE2Q04725 743 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 TSR1Q2NL82 804 aaKnown RBP26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 TRIM60Q495X7 471 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 MRPL10Q7Z7H8 261 aaKnown RBP26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 TMTC1Q8IUR5 882 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 PAWRQ96IZ0 340 aaKnown RBP26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 GPR88Q9GZN0 384 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 CNTN3Q9P232 1028 aa26.57■■□□□ 1.84
GTF2A1-201ENST00000298173 DCDC2CA8MYV0 355 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 TNNC2P02585 160 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 TMEM191BP0C7N4 346 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 NCOA4Q13772 614 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 TATDN2Q93075 761 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 ZMAT2Q96NC0 199 aaKnown RBP26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 NT5C1BQ96P26 610 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 TSPAN18Q96SJ8 248 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 CHP1Q99653 195 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 PI4K2AQ9BTU6 479 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 TMEM106CQ9BVX2 250 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 MCOLN1Q9GZU1 580 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 C11orf49Q9H6J7 331 aa26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 UBE2TQ9NPD8 197 aaPredicted RBP26.56■■□□□ 1.84
GTF2A1-201ENST00000298173 ARHGAP6O43182 974 aa26.55■■□□□ 1.84
GTF2A1-201ENST00000298173 NRDCO43847 1150 aa26.55■■□□□ 1.84
GTF2A1-201ENST00000298173 PIK3CAP42336 1068 aa26.55■■□□□ 1.84
GTF2A1-201ENST00000298173 C1orf127Q8N9H9 656 aa26.55■■□□□ 1.84
GTF2A1-201ENST00000298173 KIAA1524Q8TCG1 905 aa26.55■■□□□ 1.84
GTF2A1-201ENST00000298173 A0A0U1RQF3 1178 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 PHACTR2O75167 634 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 DRAP1Q14919 205 aaPredicted RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 TMEM132DQ14C87 1099 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 SFMBT2Q5VUG0 894 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 CYP26C1Q6V0L0 522 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 SPAG5Q96R06 1193 aa26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 ZNHIT6Q9NWK9 470 aaKnown RBP26.54■■□□□ 1.84
GTF2A1-201ENST00000298173 SIX4Q9UIU6 781 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms