RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PRLRP16471 622 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 TSPY1Q01534 308 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 SLC30A10Q6XR72 485 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 CENPUQ71F23 418 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 RUBCNQ92622 972 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 AGPAT1Q99943 283 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 RSPH10B2B2RC85 870 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 RSPH10BP0C881 870 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 IFI35P80217 286 aaPredicted RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 LMNB2Q03252 620 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 EVX2Q03828 476 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 CDO1Q16878 200 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 LRRC23Q53EV4 343 aaPredicted RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 PDIK1LQ8N165 341 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 ELMOD1Q8N336 334 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 CAPN15O75808 1086 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 ZNF844Q08AG5 666 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 PDIA2Q13087 525 aaKnown RBP14.22□□□□□ -0.13
HPS3-201ENST00000296051 DNAJC24Q6P3W2 148 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
HPS3-201ENST00000296051 POLR3FQ9H1D9 316 aaPredicted RBP14.22□□□□□ -0.13
HPS3-201ENST00000296051 YY1AP1Q9H869 796 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 ATP8B3O60423 1300 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SLC25A27O95847 323 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 CPA2P48052 419 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 PDIA5Q14554 519 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SH2D4BQ5SQS7 431 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 FRMD5Q7Z6J6 570 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
HPS3-201ENST00000296051 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 XXYLT1Q8NBI6 393 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 CAVIN3Q969G5 261 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
HPS3-201ENST00000296051 DLGAP2Q9P1A6 1054 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SLC8A2Q9UPR5 921 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 PLSCR1O15162 318 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 RASA1P20936 1047 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 KCNV1Q6PIU1 500 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 BEST2Q8NFU1 509 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 SLC13A1Q9BZW2 595 aa14.22□□□□□ -0.13
HPS3-201ENST00000296051 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 TCRBV5S4A2TA0A5A2 114 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 F5H423 210 aaPredicted RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 ARL4AP40617 200 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 VAMP7P51809 220 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 LRRC43Q8N309 656 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 UBN1Q9NPG3 1134 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 MARCOQ9UEW3 520 aaPredicted RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 GH1P01241 217 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 RANBP1P43487 201 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 KDSRQ06136 332 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 ANKRD20A8PQ5CZ79 823 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 MED15Q96RN5 788 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 EIF2AK1Q9BQI3 630 aaKnown RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 NUF2Q9BZD4 464 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 TRABDQ9H4I3 376 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 IRAK4Q9NWZ3 460 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 DIS3Q9Y2L1 958 aaKnown RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 MST1RQ04912 1400 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 MED7O43513 233 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 ARFIP2P53365 341 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 C1orf146Q5VVC0 180 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 RNF180Q86T96 592 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 VCX3AQ9NNX9 186 aa14.21□□□□□ -0.13
HPS3-201ENST00000296051 FAF1Q9UNN5 650 aaPredicted RBP14.21□□□□□ -0.13
HPS3-201ENST00000296051 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 FANCGO15287 622 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 SPDYE6P0CI01 402 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 FMO5P49326 533 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 TNFAIP2Q03169 654 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 OVGP1Q12889 678 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 MEI1Q5TIA1 1274 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 TMEM154Q6P9G4 183 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.14
HPS3-201ENST00000296051 PCSK1NQ9UHG2 260 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 MAD2L2Q9UI95 211 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 MOSPD1Q9UJG1 213 aa14.21□□□□□ -0.14
HPS3-201ENST00000296051 NOL3O60936 208 aaKnown RBP14.2□□□□□ -0.14
HPS3-201ENST00000296051 TMED1Q13445 227 aa14.2□□□□□ -0.14
HPS3-201ENST00000296051 DARS2Q6PI48 645 aaKnown RBP14.2□□□□□ -0.14
HPS3-201ENST00000296051 TMEM270Q6UE05 265 aa14.2□□□□□ -0.14
HPS3-201ENST00000296051 TEX2Q8IWB9 1127 aa14.2□□□□□ -0.14
HPS3-201ENST00000296051 TMEM143Q96AN5 459 aa14.2□□□□□ -0.14
HPS3-201ENST00000296051 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms