RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CCDC94Q9BW85 323 aaPredicted RBP27.67■■■□□ 2.02
U2AF1-201ENST00000291552 PIDD1Q9HB75 910 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 SMC3Q9UQE7 1217 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 RBM19Q9Y4C8 960 aaKnown RBP27.67■■■□□ 2.02
U2AF1-201ENST00000291552 NPHP3-ACAD11A0A0J9YXS1 232 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 I3L4J1 428 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 PLS3P13797 630 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 TKTP29401 623 aaKnown RBP27.66■■■□□ 2.02
U2AF1-201ENST00000291552 BRCC3P46736 316 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 DCLRE1AQ6PJP8 1040 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 MPZL3Q6UWV2 235 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 DDX27Q96GQ7 796 aaKnown RBP27.66■■■□□ 2.02
U2AF1-201ENST00000291552 UROC1Q96N76 676 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 IGSF9Q9P2J2 1179 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 MTRRQ9UBK8 725 aa27.66■■■□□ 2.02
U2AF1-201ENST00000291552 PLA2G4BP0C869 781 aa27.65■■■□□ 2.02
U2AF1-201ENST00000291552 MCM2P49736 904 aa27.65■■■□□ 2.02
U2AF1-201ENST00000291552 CACNB1Q02641 598 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-201ENST00000291552 ARSHQ5FYA8 562 aa27.65■■■□□ 2.02
U2AF1-201ENST00000291552 GET4Q7L5D6 327 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-201ENST00000291552 UPF2Q9HAU5 1272 aaKnown RBP27.65■■■□□ 2.02
U2AF1-201ENST00000291552 TOPORSQ9NS56 1045 aaPredicted RBP27.65■■■□□ 2.02
U2AF1-201ENST00000291552 FAM86C1Q9NVL1 165 aa27.65■■■□□ 2.02
U2AF1-201ENST00000291552 MYO15AQ9UKN7 3530 aa27.65■■■□□ 2.02
U2AF1-201ENST00000291552 C8AP07357 584 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 MAPTP10636 758 aaKnown RBP27.64■■■□□ 2.02
U2AF1-201ENST00000291552 HARSP12081 509 aaKnown RBP27.64■■■□□ 2.02
U2AF1-201ENST00000291552 KCNE1P15382 129 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 NPR3P17342 541 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 OR1D2P34982 312 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 YARSP54577 528 aaKnown RBP27.64■■■□□ 2.02
U2AF1-201ENST00000291552 NTHL1P78549 312 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 RAB33AQ14088 237 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 ASTLQ6HA08 431 aaPredicted RBP27.64■■■□□ 2.02
U2AF1-201ENST00000291552 KCTD17Q8N5Z5 321 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 CNTN3Q9P232 1028 aa27.64■■■□□ 2.02
U2AF1-201ENST00000291552 GALR2O43603 387 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-201ENST00000291552 GRIN1Q05586 938 aa27.63■■■□□ 2.01
U2AF1-201ENST00000291552 SEZ6Q53EL9 994 aa27.63■■■□□ 2.01
U2AF1-201ENST00000291552 LIN9Q5TKA1 542 aa27.63■■■□□ 2.01
U2AF1-201ENST00000291552 PDXDC1Q6P996 788 aa27.63■■■□□ 2.01
U2AF1-201ENST00000291552 C18orf25Q96B23 403 aaPredicted RBP27.63■■■□□ 2.01
U2AF1-201ENST00000291552 HAPLN2Q9GZV7 340 aa27.63■■■□□ 2.01
U2AF1-201ENST00000291552 DMDP11532 3685 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 HNRNPA1P09651 372 aaKnown RBP eCLIP27.62■■■□□ 2.01
U2AF1-201ENST00000291552 LAMP2P13473 410 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 HOXA9P31269 272 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 NOLC1Q14978 699 aaKnown RBP eCLIP27.62■■■□□ 2.01
U2AF1-201ENST00000291552 PPM1LQ5SGD2 360 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 LARP1BQ659C4 914 aaKnown RBP27.62■■■□□ 2.01
U2AF1-201ENST00000291552 GRASPQ7Z6J2 395 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-201ENST00000291552 TMEM130Q8N3G9 435 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 ACAP3Q96P50 834 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 TCHPQ9BT92 498 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 ANKFY1Q9P2R3 1169 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 CDY1Q9Y6F8 540 aa27.62■■■□□ 2.01
U2AF1-201ENST00000291552 ZFHX2Q9C0A1 2572 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-201ENST00000291552 PODXLO00592 558 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 CCL16O15467 120 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 TOM1L1O75674 476 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 NUBP1P53384 320 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 HTR4Q13639 388 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 SLC44A3Q8N4M1 653 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 ST13P5Q8NFI4 369 aaPredicted RBP27.61■■■□□ 2.01
U2AF1-201ENST00000291552 SLC7A14Q8TBB6 771 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 CDK5RAP3Q96JB5 506 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 MFSD1Q9H3U5 465 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 SLC38A7Q9NVC3 462 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.61■■■□□ 2.01
U2AF1-201ENST00000291552 KCND2Q9NZV8 630 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.61■■■□□ 2.01
U2AF1-201ENST00000291552 BACE2Q9Y5Z0 518 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 VPS13AQ96RL7 3174 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 ANK1P16157 1881 aa27.61■■■□□ 2.01
U2AF1-201ENST00000291552 ANHXE9PGG2 379 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 FSHRP23945 695 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 NCKAP1LP55160 1127 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 STRN3Q13033 797 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 SLC10A6Q3KNW5 377 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 SIX5Q8N196 739 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 FLCNQ8NFG4 579 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 AK8Q96MA6 479 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 REEP2Q9BRK0 252 aa27.6■■■□□ 2.01
U2AF1-201ENST00000291552 H0Y858 1186 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 PI15O43692 258 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 CLCN5P51795 746 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 SMTNP53814 917 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 AXDND1Q5T1B0 1012 aaPredicted RBP27.59■■■□□ 2.01
U2AF1-201ENST00000291552 ZPBP2Q6X784 338 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 FBXL21Q9UKT6 434 aa27.59■■■□□ 2.01
U2AF1-201ENST00000291552 KRBA1A5PL33 1030 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 SLC26A4O43511 780 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 TRAPPC3O43617 180 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 CFHP08603 1231 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 POU2F2P09086 479 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 MCL1Q07820 350 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 CUL4AQ13619 759 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 VARS2Q5ST30 1063 aaKnown RBP27.58■■■□□ 2.01
U2AF1-201ENST00000291552 ANKS3Q6ZW76 656 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms