RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ODF2LQ9ULJ1 636 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 CLIC4Q9Y696 253 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 ZMYND10O75800 440 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
SNF8-201ENST00000290330 KCNE1P15382 129 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 PLCG1P19174 1290 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 DHX8Q14562 1220 aaKnown RBP11.45□□□□□ -0.58
SNF8-201ENST00000290330 MCM6Q14566 821 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 PTPAQ15257 358 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 SEZ6Q53EL9 994 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 PDXDC1Q6P996 788 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 HAUS6Q7Z4H7 955 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 GPBP1Q86WP2 473 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 UBALD2Q8IYN6 164 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 FBXL6Q8N531 539 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 SMG7Q92540 1137 aaKnown RBP11.45□□□□□ -0.58
SNF8-201ENST00000290330 RAD54LQ92698 747 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
SNF8-201ENST00000290330 INTS4Q96HW7 963 aaKnown RBP11.45□□□□□ -0.58
SNF8-201ENST00000290330 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 CCSER1Q9C0I3 900 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 KCNH6Q9H252 994 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 SMOC2Q9H3U7 446 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 CNTN3Q9P232 1028 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
SNF8-201ENST00000290330 PLXNA3P51805 1871 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 CLUHO75153 1309 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 H0YCG3 227 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 CLDN3O15551 220 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 ADAM12O43184 909 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 N4BP1O75113 896 aaKnown RBP11.44□□□□□ -0.58
SNF8-201ENST00000290330 BRCC3P46736 316 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 ZNF131P52739 623 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 MCL1Q07820 350 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 RESTQ13127 1097 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 NOLC1Q14978 699 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNF8-201ENST00000290330 SLC10A6Q3KNW5 377 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 USP49Q70CQ1 688 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
SNF8-201ENST00000290330 MYCT1Q8N699 235 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 STAMQ92783 540 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 EPSTI1Q96J88 318 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 HAPLN2Q9GZV7 340 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 PIDD1Q9HB75 910 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 MTRRQ9UBK8 725 aa11.44□□□□□ -0.58
SNF8-201ENST00000290330 FBXO2Q9UK22 296 aaPredicted RBP11.44□□□□□ -0.58
SNF8-201ENST00000290330 DENND4AQ7Z401 1863 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 I3L4J1 428 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 K7ELQ4 463 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 PODXLO00592 558 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 TRAK2O60296 914 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 FAM13AO94988 1023 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 PDGFBP01127 241 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 GBP2P32456 591 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 OR1D2P34982 312 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 DDIT3P35638 169 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 RAB33AQ14088 237 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 SPECC1Q5M775 1068 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 IER5LQ5T953 404 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 LARP4BQ92615 738 aaKnown RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 FIZ1Q96SL8 496 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 PLEKHA5Q9HAU0 1116 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
SNF8-201ENST00000290330 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
SNF8-201ENST00000290330 MYO10Q9HD67 2058 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 C2orf16Q68DN1 1984 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 K7ENM7 598 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 PIGRP01833 764 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
SNF8-201ENST00000290330 C8AP07357 584 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 CLTAP09496 248 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 HNRNPA1P09651 372 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNF8-201ENST00000290330 CXCL8P10145 99 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 SCP2P22307 547 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 AVPR2P30518 371 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 LIG4P49917 911 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 VCPP55072 806 aaKnown RBP11.42□□□□□ -0.58
SNF8-201ENST00000290330 CEBPZQ03701 1054 aaKnown RBP11.42□□□□□ -0.58
SNF8-201ENST00000290330 TDGQ13569 410 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 LIN9Q5TKA1 542 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 BICD1Q96G01 975 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 CLIC6Q96NY7 704 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 MYADMQ96S97 322 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 ZHX3Q9H4I2 956 aa11.42□□□□□ -0.58
SNF8-201ENST00000290330 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms