RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 EPB41L5Q9HCM4 733 aa7.38□□□□□ -1.23
VPS8-201ENST00000287546 RGPD3A6NKT7 1758 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 RGPD4Q7Z3J3 1758 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 ZNF541Q9H0D2 1346 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 F8VZ95 297 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 FZD9O00144 591 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 PODXLO00592 558 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 FTLP02792 175 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 KLRC1P26715 233 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 RWDD2BP57060 319 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 SPATA33Q96N06 139 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 INPP4AQ96PE3 977 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 MSRAQ9UJ68 235 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 RPTORQ8N122 1335 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 GZMAP12544 262 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 EPHB1P54762 984 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 E2F5Q15329 346 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 EEPD1Q7L9B9 569 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 DDX42Q86XP3 938 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS8-201ENST00000287546 MAP4K3Q8IVH8 894 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 SPATC1LQ9H0A9 340 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 GANQ9H2C0 597 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 A1CFQ9NQ94 594 aaKnown RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 CYP39A1Q9NYL5 469 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 ANAPC5Q9UJX4 755 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 COL11A2P13942 1736 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 LOC102724159A0A0B4J2E5 919 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 HBP1O60381 514 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 LCA5LO95447 670 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 TAL1P17542 331 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 CASP5P51878 434 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 ENPEPQ07075 957 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 PWP2Q15269 919 aaKnown RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 METTL7BQ6UX53 244 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 USP50Q70EL3 339 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 WDR48Q8TAF3 677 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 CCDC110Q8TBZ0 833 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 RNF217Q8TC41 542 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 CCHCR1Q8TD31 782 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 SMC6Q96SB8 1091 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 ASIC3Q9UHC3 531 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 AKT3Q9Y243 479 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 FAM187AA6NFU0 413 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 S100BP04271 92 aaPredicted RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 CALB1P05937 261 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 CETPP11597 493 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 KCNMA1Q12791 1236 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 CLEC4DQ8WXI8 215 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 MAGOHBQ96A72 148 aaKnown RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 CNOT8Q9UFF9 292 aaKnown RBP7.37□□□□□ -1.23
VPS8-201ENST00000287546 RAB21Q9UL25 225 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 PCDHB2Q9Y5E7 798 aa7.37□□□□□ -1.23
VPS8-201ENST00000287546 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 TXNP10599 105 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 SLC1A1P43005 524 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 HUNKP57058 714 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 TAF11Q15544 211 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 TMEM35BQ8NCS4 154 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 COG1Q8WTW3 980 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 ZC3H15Q8WU90 426 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 CRYGNQ8WXF5 182 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 STRIP2Q9ULQ0 834 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 FAN1Q9Y2M0 1017 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 ASTN2O75129 1339 aaPredicted RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 CTNNA1P35221 906 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 ALDH5A1P51649 535 aaPredicted RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 ST8SIA6P61647 398 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 VSNL1P62760 191 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 TFAMQ00059 246 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 TAP1Q03518 808 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 RAD51Q06609 339 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 DENND2CQ68D51 928 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 ZNF564Q8TBZ8 553 aaPredicted RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 YIPF2Q9BWQ6 316 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 NSRP1Q9H0G5 558 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 CARD9Q9H257 536 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 MAN1C1Q9NR34 630 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 DPP7Q9UHL4 492 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS8-201ENST00000287546 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 UBXN8O00124 270 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 SART1O43290 800 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 FGGP02679 453 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 PRKCBP05771 671 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 CHRNA3P32297 505 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 GCKP35557 465 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 GCLCP48506 637 aaPredicted RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 GPC3P51654 580 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 EIF3BP55884 814 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
VPS8-201ENST00000287546 DHX34Q14147 1143 aaKnown RBP7.36□□□□□ -1.23
VPS8-201ENST00000287546 RRP1BQ14684 758 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms