RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 XPAP23025 273 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 ATP6V1E1P36543 226 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 DDI1Q8WTU0 396 aa16.64■□□□□ 0.25
MSI2-201ENST00000284073 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
MSI2-201ENST00000284073 BNIP3LO60238 219 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 E2F7Q96AV8 911 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 CAB39Q9Y376 341 aaPredicted RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 UTYO14607 1347 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 ZNF189O75820 626 aaPredicted RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 COPAP53621 1224 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 OMA1Q96E52 524 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 TMEM117Q9H0C3 514 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 EHD4Q9H223 541 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 TMEM247A6NEH6 219 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 XPOTO43592 962 aaKnown RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 LZTS3O60299 673 aaPredicted RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 SMNDC1O75940 238 aaKnown RBP eCLIP16.63■□□□□ 0.25
MSI2-201ENST00000284073 UCHL3P15374 230 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 NUDT2P50583 147 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 CPA5Q8WXQ8 436 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 NLRP4Q96MN2 994 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 DHX35Q9H5Z1 703 aaKnown RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 TRIM25Q14258 630 aaKnown RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 ZNF699Q32M78 642 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 FAM153AQ9UHL3 310 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
MSI2-201ENST00000284073 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 RFC5P40937 340 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 ACTR2P61160 394 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 STK4Q13043 487 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 SLC27A3Q5K4L6 730 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 OR6P1Q8NGX9 317 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 FAM8A1Q9UBU6 413 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 SLC12A6Q9UHW9 1150 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
MSI2-201ENST00000284073 M0QYV0 167 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 SDC4P31431 198 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 C6orf10Q5SRN2 563 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 FRMD5Q7Z6J6 570 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 SCUBE1Q8IWY4 988 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 TSC22D2O75157 780 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 COMTP21964 271 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 MTDHQ86UE4 582 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 VPS50Q96JG6 964 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 FAM129AQ9BZQ8 928 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 EML4Q9HC35 981 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 RAB6BQ9NRW1 208 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 SNAP23O00161 211 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 PSMC3P17980 439 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 C16orf72Q14CZ0 275 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 Q3C1V9 767 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 PDXDC2PQ6P474 469 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 PABPC3Q9H361 631 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 RUNX1T1Q06455 604 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 R3HDM1Q15032 1099 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 KDELC2Q7Z4H8 507 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 MOV10L1Q9BXT6 1211 aaKnown RBP16.62■□□□□ 0.25
MSI2-201ENST00000284073 CASS4Q9NQ75 786 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 STMN3Q9NZ72 180 aa16.62■□□□□ 0.25
MSI2-201ENST00000284073 CCDC142Q17RM4 750 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 WLSQ5T9L3 541 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 CDKL3Q8IVW4 592 aaPredicted RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 FAM193BQ96PV7 902 aaPredicted RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 FAM111AQ96PZ2 611 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 SLC9A1P19634 815 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 FAM102AQ5T9C2 384 aaPredicted RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 AP4S1Q9Y587 144 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 UBA6A0AVT1 1052 aaPredicted RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 H0YIN7 160 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 PID1Q7Z2X4 250 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 PDAP1Q13442 181 aaKnown RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 LMBRD2Q68DH5 695 aaPredicted RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 HORMAD1Q86X24 394 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 RNF139Q8WU17 664 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 PDCD6IPQ8WUM4 868 aaKnown RBP16.61■□□□□ 0.25
MSI2-201ENST00000284073 AGAP3Q96P47 875 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 DENND3A2RUS2 1198 aa16.61■□□□□ 0.25
MSI2-201ENST00000284073 IFNA8P32881 189 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms