RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ZNF707Q96C28 371 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 ASIC4Q96FT7 647 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 STK17AQ9UEE5 414 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 KMT2EQ8IZD2 1858 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 SF3B1O75533 1304 aaKnown RBP eCLIP15.78■□□□□ 0.125e-6■■■■■ 70.8
HMGN3-201ENST00000275036 K7ENM7 598 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 ADAM12O43184 909 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 TRAK2O60296 914 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
HMGN3-201ENST00000275036 GLUD1P00367 558 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 ASGR2P07307 311 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 CLCNKBP51801 687 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
HMGN3-201ENST00000275036 MCL1Q07820 350 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 SLC10A6Q3KNW5 377 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 RRAGBQ5VZM2 374 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 LILRA6Q6PI73 481 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 TMEM130Q8N3G9 435 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
HMGN3-201ENST00000275036 ACAP3Q96P50 834 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 ZHX3Q9H4I2 956 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 NR2E1Q9Y466 385 aa15.78■□□□□ 0.12
HMGN3-201ENST00000275036 MYMKA6NI61 221 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 H0YCG3 227 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 SPTLC2O15270 562 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 PAPLNO95428 1278 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 F13A1P00488 732 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 PIGRP01833 764 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 KCNE1P15382 129 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 STK38Q15208 465 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 UPP1Q16831 310 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 FOXD4L6Q3SYB3 417 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 FAM171A1Q5VUB5 890 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 SLC39A4Q6P5W5 647 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 FOXD4L3Q6VB84 417 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 C15orf39Q6ZRI6 1047 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 KREMEN2Q8NCW0 462 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 CMASQ8NFW8 434 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 DDX12PQ92771 950 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 DNAJC19Q96DA6 116 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.12
HMGN3-201ENST00000275036 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 ARIH1Q9Y4X5 557 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-201ENST00000275036 CCDC195A0A1B0GUA6 201 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 TMEM189-UBE2V1I3L0A0 370 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 I3L4J1 428 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 CLDN3O15551 220 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 FAM189A1O60320 539 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 PDGFBP01127 241 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 TXLNAP40222 546 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 TNFSF9P41273 254 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 GTF2BQ00403 316 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 ZC2HC1CQ53FD0 456 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 BMP8AQ7Z5Y6 402 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 SFR1Q86XK3 245 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 ZDHHC14Q8IZN3 488 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 TDRD5Q8NAT2 981 aaKnown RBP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 C18orf25Q96B23 403 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 BICD1Q96G01 975 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 TTPALQ9BTX7 342 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 IKZF4Q9H2S9 585 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.76■□□□□ 0.11
HMGN3-201ENST00000275036 LIMD1Q9UGP4 676 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 USTQ9Y2C2 406 aa15.76■□□□□ 0.11
HMGN3-201ENST00000275036 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 TISP43B9A030 160 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 HNRNPDLO14979 420 aaKnown RBP15.75■□□□□ 0.11
HMGN3-201ENST00000275036 PPP6R2O75170 966 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 B3GAT3O94766 335 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 CXCL8P10145 99 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 FGFR3P22607 806 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
HMGN3-201ENST00000275036 BRCC3P46736 316 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 LIG4P49917 911 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 PSMD5Q16401 504 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 DCLRE1AQ6PJP8 1040 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 RSPO2Q6UXX9 243 aaPredicted RBP15.75■□□□□ 0.11
HMGN3-201ENST00000275036 CCDC149Q6ZUS6 474 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 MAP4K3Q8IVH8 894 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 PDILTQ8N807 584 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms