RNA–Protein interactions for RNA: ENST00000273063.10

SLC4A3-201, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC4A3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-201ENST00000273063 NPTX2P47972 431 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 PHLDB3Q6NSJ2 640 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 OTOP1Q7RTM1 612 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 NSMCE1Q8WV22 266 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 G3BP2Q9UN86 482 aaKnown RBP17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 SLC1A1P43005 524 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 SLC10A4Q96EP9 437 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 ZSWIM1Q9BR11 485 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 SPC25Q9HBM1 224 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 ASNSD1Q9NWL6 643 aa17.25■□□□□ 0.35
SLC4A3-201ENST00000273063 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 AGTP01019 485 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 RAB3IL1Q8TBN0 382 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 MED15Q96RN5 788 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 ANKEF1Q9NU02 776 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 IGSF9BQ9UPX0 1349 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 P4HA2O15460 535 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 KRT37O76014 449 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 RALAP11233 206 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 SDC4P31431 198 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 SLC12A3P55017 1021 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 BCAR1P56945 870 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 TMPRSS15P98073 1019 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 KCNMA1Q12791 1236 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 GABPB2Q8TAK5 448 aaPredicted RBP17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 ETNK1Q9HBU6 452 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 TISP43B9A030 160 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 ESRRAP11474 423 aaPredicted RBP17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 PEX19P40855 299 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 PTGISQ16647 500 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 C1orf228Q6PIY5 440 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 SLC47A2Q86VL8 602 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 C4orf33Q8N1A6 199 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 SIX6OS1Q8N1H7 587 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
SLC4A3-201ENST00000273063 COPEO14579 308 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 MAP2K7O14733 419 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 GIPC1O14908 333 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 MYBL2P10244 700 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 COILP38432 576 aaPredicted RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 NPY5RQ15761 445 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 SMTNL2Q2TAL5 461 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 TTC25Q96NG3 672 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 C2orf40Q9H1Z8 148 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 MEIS2O14770 477 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 CDH16O75309 829 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 HSPA9P38646 679 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 RARRES1P49788 294 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ACTR2P61160 394 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 CCT6BQ92526 530 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 CYP11B1P15538 503 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ITIH2P19823 946 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 EFNA5P52803 228 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ITGA8P53708 1063 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 FAM107AO95990 144 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 GARSP41250 739 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ECM1Q16610 540 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 HIF1AQ16665 826 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 DCLK2Q8N568 766 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 TSEN2Q8NCE0 465 aaKnown RBP17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 ACTRT1Q8TDG2 376 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 SEC16BQ96JE7 1060 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 VCXQ9H320 206 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
SLC4A3-201ENST00000273063 GRAP2O75791 330 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 TRIM55Q9BYV6 548 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 VCX3BQ9H321 246 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 PABPC3Q9H361 631 aaKnown RBP17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 TMEM120BA0PK00 339 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 RRM1P23921 792 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 GTF2H1P32780 548 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 GABPAQ06546 454 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 SV2AQ7L0J3 742 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 DEPDC1BQ8WUY9 529 aa17.22■□□□□ 0.35
SLC4A3-201ENST00000273063 BAP1Q92560 729 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms