RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 APOBEC2Q9Y235 224 aaKnown RBP12.79□□□□□ -0.36
ERBB2-201ENST00000269571 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 B2RBV5 119 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 CHRNA5P30532 468 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 RCN1Q15293 331 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 WDR59Q6PJI9 974 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 RHPN2Q8IUC4 686 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
ERBB2-201ENST00000269571 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
ERBB2-201ENST00000269571 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NR1H3Q13133 447 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 CYTH1Q15438 398 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 ZCWPW2Q504Y3 356 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 RICTORQ6R327 1708 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 ZBBXA8MT70 800 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 F8VZ95 297 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 IRF6O14896 467 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 PSMA2P25787 234 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 GABPAQ06546 454 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 MAPK7Q13164 816 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 STAT4Q14765 748 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 KBTBD12Q3ZCT8 623 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 ZNF571Q7Z3V5 609 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 NUDCD3Q8IVD9 361 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 DNAAF3Q8N9W5 541 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 EPHB6O15197 1021 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 FMO5P49326 533 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 STK33Q9BYT3 514 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 APOEP02649 317 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 AKR1B1P15121 316 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 CRKP46108 304 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 CASP4P49662 377 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 THOC5Q13769 683 aaKnown RBP12.78□□□□□ -0.36
ERBB2-201ENST00000269571 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 FAM213AQ9BRX8 229 aa12.78□□□□□ -0.36
ERBB2-201ENST00000269571 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.36
ERBB2-201ENST00000269571 IPO5O00410 1097 aaKnown RBP12.77□□□□□ -0.36
ERBB2-201ENST00000269571 PDXKO00764 312 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 SLC37A4O43826 429 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 ZBED1O96006 694 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.36
ERBB2-201ENST00000269571 CAV1Q03135 178 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 MEI1Q5TIA1 1274 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.36
ERBB2-201ENST00000269571 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.36
ERBB2-201ENST00000269571 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 TMEM237Q96Q45 408 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 VPS11Q9H270 941 aa12.77□□□□□ -0.36
ERBB2-201ENST00000269571 H3BRJ5 948 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 CCDC22O60826 627 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-201ENST00000269571 AMPD2Q01433 879 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 GRB10Q13322 594 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 PDIA5Q14554 519 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 ITIH4Q14624 930 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 Q3C1V9 767 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 KLC3Q6P597 504 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 TBC1D23Q9NUY8 699 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 LOC100653049A0A140TA62 436 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 KRT34O76011 436 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 GJA8P48165 433 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 IL1RL1Q01638 556 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 TMEM179Q6ZVK1 233 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 MTBPQ96DY7 904 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
ERBB2-201ENST00000269571 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 APEX2Q9UBZ4 518 aa12.77□□□□□ -0.37
ERBB2-201ENST00000269571 GGA2Q9UJY4 613 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms