RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SOX4Q06945 474 aaPredicted RBP17.58■□□□□ 0.4
USE1-201ENST00000263897 MCL1Q07820 350 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 NOLC1Q14978 699 aaKnown RBP eCLIP17.58■□□□□ 0.4
USE1-201ENST00000263897 SLC10A6Q3KNW5 377 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 CYP26C1Q6V0L0 522 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 TRIM67Q6ZTA4 783 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 RHOBTB2Q9BYZ6 727 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 HAPLN2Q9GZV7 340 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 CNTN3Q9P232 1028 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 ANKFY1Q9P2R3 1169 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 TBX20Q9UMR3 447 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 MYBP10242 640 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 FGFR3P22607 806 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 PSMD5Q16401 504 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 PTPN21Q16825 1174 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 SEZ6Q53EL9 994 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 PDXDC1Q6P996 788 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
USE1-201ENST00000263897 ZDHHC14Q8IZN3 488 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 PLCD3Q8N3E9 789 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 BICD1Q96G01 975 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 STK17AQ9UEE5 414 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 C2orf16Q68DN1 1984 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
USE1-201ENST00000263897 TRIOO75962 3097 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 TBCAO75347 108 aaKnown RBP17.56■□□□□ 0.4
USE1-201ENST00000263897 RFPL2O75678 378 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 PAPLNO95428 1278 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 PIGRP01833 764 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 CLTAP09496 248 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 RPL9P32969 192 aaKnown RBP17.56■□□□□ 0.4
USE1-201ENST00000263897 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
USE1-201ENST00000263897 HFE2Q6ZVN8 426 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 BMP8AQ7Z5Y6 402 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
USE1-201ENST00000263897 KREMEN2Q8NCW0 462 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 C3orf58Q8NDZ4 430 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 FIZ1Q96SL8 496 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 PLEKHA5Q9HAU0 1116 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 LIMD1Q9UGP4 676 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 HCN4Q9Y3Q4 1203 aa17.56■□□□□ 0.4
USE1-201ENST00000263897 ARIH1Q9Y4X5 557 aaPredicted RBP17.56■□□□□ 0.4
USE1-201ENST00000263897 K7ENM7 598 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 NMT1P30419 496 aaKnown RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 ABCD1P33897 745 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 TXLNAP40222 546 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 BRCC3P46736 316 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 NASPP49321 788 aaPredicted RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 LIG4P49917 911 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 GTF2BQ00403 316 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 CCDC149Q6ZUS6 474 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 SV2BQ7L1I2 683 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 OTOP3Q7RTS5 596 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 TDRD5Q8NAT2 981 aaKnown RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 C18orf25Q96B23 403 aaPredicted RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 ZNF707Q96C28 371 aaPredicted RBP17.55■□□□□ 0.4
USE1-201ENST00000263897 ZDHHC7Q9NXF8 308 aa17.55■□□□□ 0.4
USE1-201ENST00000263897 TTC26A0AVF1 554 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 TMEM221A6NGB7 291 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 M0R296 226 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 PODXLO00592 558 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 HNRNPDLO14979 420 aaKnown RBP17.54■□□□□ 0.4
USE1-201ENST00000263897 ADAM12O43184 909 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 ZMYND10O75800 440 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 PDIA4P13667 645 aaKnown RBP17.54■□□□□ 0.4
USE1-201ENST00000263897 OR1D2P34982 312 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 SIGLEC14Q08ET2 396 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 RAB33AQ14088 237 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 KYAT1Q16773 422 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 DYMQ7RTS9 669 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 DDX12PQ92771 950 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 ACSF2Q96CM8 615 aaPredicted RBP17.54■□□□□ 0.4
USE1-201ENST00000263897 MFSD14AQ96MC6 490 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 PRKD2Q9BZL6 878 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
USE1-201ENST00000263897 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
USE1-201ENST00000263897 MTRRQ9UBK8 725 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 SORCS3Q9UPU3 1222 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 DENND4AQ7Z401 1863 aa17.54■□□□□ 0.4
USE1-201ENST00000263897 ZDBF2Q9HCK1 2354 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 A0A0B4J269 797 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 MYMKA6NI61 221 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 I3L4J1 428 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 OGTO15294 1046 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 CXCL8P10145 99 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 TKTP29401 623 aaKnown RBP17.53■□□□□ 0.4
USE1-201ENST00000263897 TNFSF9P41273 254 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 STK38Q15208 465 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 ZBTB6Q15916 424 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms