RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ZSCAN5CA6NGD5 496 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PHACTR2O75167 634 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TOM1L1O75674 476 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 VNN1O95497 513 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 EDN1P05305 212 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 SRGAP2CP0DJJ0 459 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TXNP10599 105 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 AP3M2P53677 418 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PTPRJQ12913 1337 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 MESDQ14696 234 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PLCB4Q15147 1175 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PPP2R5EQ16537 467 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 DCAF12L1Q5VU92 463 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 MAATS1Q7Z4T9 603 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TRIM50Q86XT4 487 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CASKIN2Q8WXE0 1202 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CCDC113Q9H0I3 377 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 DDX47Q9H0S4 455 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PLXNA1Q9UIW2 1896 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CNTNAP2Q9UHC6 1331 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 MSCO60682 206 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CLSTN1O94985 981 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 SYF2O95926 243 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 PRKCBP05771 671 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ITGA4P13612 1032 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TBXAS1P24557 533 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 GJA5P36382 358 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 GGCXP38435 758 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CCNA1P78396 465 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 CUL1Q13616 776 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TFDP1Q14186 410 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 MAPK6Q16659 721 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ALS2CLQ60I27 953 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 EXOC4Q96A65 974 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
SPTLC1-201ENST00000262554 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 HBP1O60381 514 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 HSF2BPO75031 334 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 RNF40O75150 1001 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 COMTP21964 271 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 GYS2P54840 703 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 GRM1Q13255 1194 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 CUL2Q13617 745 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 SPOPLQ6IQ16 392 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 ZBTB33Q86T24 672 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 LRRC71Q8N4P6 559 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 GOLGA6L1Q8N7Z2 621 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 ALG3Q92685 438 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 ACO2Q99798 780 aaKnown RBP13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 IMPG2Q9BZV3 1241 aa13.86□□□□□ -0.19
SPTLC1-201ENST00000262554 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 UTRNP46939 3433 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 GLTPD2A6NH11 291 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 CYP2C8P10632 490 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 CYP2C19P33261 490 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 SEZ6Q53EL9 994 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 ARMCX2Q7L311 632 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 RHPN2Q8IUC4 686 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 WDR49Q8IV35 697 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 COPS5Q92905 334 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 RUFY1Q96T51 708 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 EFCC1Q9HA90 598 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 CNOT8Q9UFF9 292 aaKnown RBP13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 CHORDC1Q9UHD1 332 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 AMACRQ9UHK6 382 aa13.85□□□□□ -0.19
SPTLC1-201ENST00000262554 CCDC66A2RUB6 948 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 UNCXA6NJT0 531 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 AGPSO00116 658 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 OGTO15294 1046 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 SPOPO43791 374 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 OPA1O60313 960 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 CLTAP09496 248 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 MYBL1P10243 752 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 UNGP13051 313 aaPredicted RBP13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 HSPA6P17066 643 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 PTENP60484 403 aa13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 NOP14P78316 857 aaKnown RBP13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
SPTLC1-201ENST00000262554 NCOA4Q13772 614 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms