RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FAM47DPA6NHR8 397 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 SNX3O60493 162 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 POLD1P28340 1107 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 RFC5P40937 340 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 COG7P83436 770 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 ITIH3Q06033 890 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 THOC5Q13769 683 aaKnown RBP10.72□□□□□ -0.69
PALB2-201ENST00000261584 CNGA2Q16280 664 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 CEP55Q53EZ4 464 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 C1orf146Q5VVC0 180 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 MCEEQ96PE7 176 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 KCTD10Q9H3F6 313 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 RIOX1Q9H6W3 641 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 NGRNQ9NPE2 291 aaKnown RBP10.72□□□□□ -0.69
PALB2-201ENST00000261584 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
PALB2-201ENST00000261584 ASTN1O14525 1302 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 O00370 1275 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 CAPN9O14815 690 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 RTN2O75298 545 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 GNAT1P11488 350 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 HNRNPH3P31942 346 aaKnown RBP10.72□□□□□ -0.69
PALB2-201ENST00000261584 ARFIP2P53365 341 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 PDE1CQ14123 709 aaPredicted RBP10.72□□□□□ -0.69
PALB2-201ENST00000261584 DLGAP5Q15398 846 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 AOC3Q16853 763 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 TMEM119Q4V9L6 283 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 CROCCP2Q86T23 111 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 FITM2Q8N6M3 262 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 SLC26A7Q8TE54 656 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 ZNF341Q9BYN7 854 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 EXOC7Q9UPT5 735 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 ABCC6O95255 1503 aa10.72□□□□□ -0.69
PALB2-201ENST00000261584 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 STAM2O75886 525 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 SWSAP1Q6NVH7 229 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 C3orf62Q6ZUJ4 267 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 CYP4X1Q8N118 509 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 C7orf31Q8N865 590 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 UNC45AQ9H3U1 944 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 RNF19AQ9NV58 838 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 SLC12A6Q9UHW9 1150 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 MYH6P13533 1939 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 CDH16O75309 829 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 STK10O94804 968 aaKnown RBP10.71□□□□□ -0.69
PALB2-201ENST00000261584 ASTE1Q2TB18 679 aaPredicted RBP10.71□□□□□ -0.69
PALB2-201ENST00000261584 KCTD6Q8NC69 237 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 CCT6BQ92526 530 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 SYN2Q92777 582 aaPredicted RBP10.71□□□□□ -0.69
PALB2-201ENST00000261584 NAF1Q96HR8 494 aaKnown RBP10.71□□□□□ -0.69
PALB2-201ENST00000261584 GABBR1Q9UBS5 961 aa10.71□□□□□ -0.69
PALB2-201ENST00000261584 ETS2P15036 469 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 GNA15P30679 374 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 NRLP54845 237 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 MTMR1Q13613 665 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.7
PALB2-201ENST00000261584 RSPH3Q86UC2 560 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 EMC1Q8N766 993 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 DNAJC9Q8WXX5 260 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 KIAA1683Q9H0B3 1180 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 ANLNQ9NQW6 1124 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 FZD1Q9UP38 647 aa10.71□□□□□ -0.7
PALB2-201ENST00000261584 CFAP73A6NFT4 308 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 TGFB1I1O43294 461 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CPP00450 1065 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 RARGP13631 454 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 KCNA3P22001 575 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 PSMA2P25787 234 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 NCALDP61601 193 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 BMPR2Q13873 1038 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 KRT81Q14533 505 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
PALB2-201ENST00000261584 DCAF12L1Q5VU92 463 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 KRT39Q6A163 491 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CENPUQ71F23 418 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 TEKT4Q8WW24 435 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 PAGR1Q9BTK6 254 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 TRIM55Q9BYV6 548 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.7
PALB2-201ENST00000261584 MCM8Q9UJA3 840 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 MEI4A8MW99 385 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 WDR64B1ANS9 1081 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 B2RBV5 119 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 MAP3K7O43318 606 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 LPXNO60711 386 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 SLITRK3O94933 977 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 ADRA1DP25100 572 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CHRNA5P30532 468 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 PGM1P36871 562 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 PCNX4Q63HM2 1172 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 418.4 ms