RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 USP17L8P0C7I0 530 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 ATF2P15336 505 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 VAV1P15498 845 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 KRT15P19012 456 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CYP11B2P19099 503 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 RPL13P26373 211 aaKnown RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 RPA3P35244 121 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 ADCY8P40145 1251 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 VPS41P49754 854 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 HADHBP55084 474 aaKnown RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 NR1H3Q13133 447 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 Q4G0T1 1027 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SBK1Q52WX2 424 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SGO2Q562F6 1265 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 OLFML2BQ68BL8 750 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC174Q6PII3 467 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 RINLQ6ZS11 566 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 TRABD2AQ86V40 505 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 C12orf50Q8NA57 414 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 PTCD3Q96EY7 689 aaKnown RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 MPP4Q96JB8 637 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 TMEM47Q9BQJ4 181 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 UBA5Q9GZZ9 404 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 LRRC19Q9H756 370 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CYLDQ9NQC7 956 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 HEY2Q9UBP5 337 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CHORDC1Q9UHD1 332 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CLIC2O15247 247 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ADAMTS2O95450 1211 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 NR3C1P04150 777 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PABPC4LP0CB38 370 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 IL2RBP14784 551 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SERPINB3P29508 390 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PGM1P36871 562 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CAV1Q03135 178 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZBTB16Q05516 673 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ARHGAP44Q17R89 818 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PLEKHG4Q58EX7 1191 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CYP4F22Q6NT55 531 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 C4orf33Q8N1A6 199 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ARHGAP24Q8N264 748 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF398Q8TD17 642 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF75CPQ92670 426 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 NMD3Q96D46 503 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 DYNLL2Q96FJ2 89 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 UIMC1Q96RL1 719 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SYT11Q9BT88 431 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TRAIPQ9BWF2 469 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 STK32BQ9NY57 414 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ANKFY1Q9P2R3 1169 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PCDHA12Q9UN75 941 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SMG5Q9UPR3 1016 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZMYM2Q9UBW7 1377 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 NRAPQ86VF7 1730 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 LAMB1P07942 1786 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 A0A0G2JND7 137 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 EXOC1LA0A1B0GW35 172 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 POC1B-GALNT4F8VUJ3 575 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CLDN3O15551 220 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 RNASEH1O60930 286 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 BAG2O95816 211 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ANPEPP15144 967 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 AMPD1P23109 780 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TNNI2P48788 182 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ERFP50548 548 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 GPC5P78333 572 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TMEM62Q0P6H9 643 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 OVGP1Q12889 678 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 R3HDM1Q15032 1099 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SLC1A5Q15758 541 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC62Q6P9F0 684 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF444Q8N0Y2 327 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SYT2Q8N9I0 419 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 RFWD2Q8NHY2 731 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 WDR66Q8TBY9 1149 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 SLCO2A1Q92959 643 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PPP2R3CQ969Q6 453 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 FAM163AQ96GL9 167 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PIGSQ96S52 555 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 MXD3Q9BW11 206 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 TAS2R1Q9NYW7 299 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 HSFX1Q9UBD0 423 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 LTBP4Q8N2S1 1624 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 LAMB2P55268 1798 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 POTEB3A0JP26 581 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 POTECB2RU33 542 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PDXKO00764 312 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 GAS8O95995 478 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 IVDP26440 423 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 MECOMQ03112 1051 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 PKN2Q16513 984 aaKnown RBP7.67□□□□□ -1.18
CSDE1-201ENST00000261443 DDB1Q16531 1140 aa7.67□□□□□ -1.18
CSDE1-201ENST00000261443 CAVIN4Q5BKX8 364 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms