RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 SNX27Q96L92 541 aa18.51■□□□□ 0.55
CGREF1-201ENST00000260595 TBC1D32Q96NH3 1257 aa18.51■□□□□ 0.55
CGREF1-201ENST00000260595 TOPORSQ9NS56 1045 aaPredicted RBP18.51■□□□□ 0.55
CGREF1-201ENST00000260595 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.51■□□□□ 0.55
CGREF1-201ENST00000260595 MTRRQ9UBK8 725 aa18.51■□□□□ 0.55
CGREF1-201ENST00000260595 GALR2O43603 387 aaPredicted RBP18.5■□□□□ 0.55
CGREF1-201ENST00000260595 HNRNPA1P09651 372 aaKnown RBP eCLIP18.5■□□□□ 0.55
CGREF1-201ENST00000260595 PLA2G4BP0C869 781 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 LAMP2P13473 410 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 KCNE1P15382 129 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 OR1D2P34982 312 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 BRCC3P46736 316 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 CLCN5P51795 746 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 ARSHQ5FYA8 562 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 SLC44A3Q8N4M1 653 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 ACAP3Q96P50 834 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
CGREF1-201ENST00000260595 KCND2Q9NZV8 630 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 CNTN3Q9P232 1028 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 SMC3Q9UQE7 1217 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 BACE2Q9Y5Z0 518 aa18.5■□□□□ 0.55
CGREF1-201ENST00000260595 MTCL1Q9Y4B5 1905 aaKnown RBP18.5■□□□□ 0.55
CGREF1-201ENST00000260595 NPHP3-ACAD11A0A0J9YXS1 232 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 ANHXE9PGG2 379 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 I3L4J1 428 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 TOM1L1O75674 476 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 C8AP07357 584 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 MAPTP10636 758 aaKnown RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 TKTP29401 623 aaKnown RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 HOXA9P31269 272 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 GET4Q7L5D6 327 aaPredicted RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 GRASPQ7Z6J2 395 aaPredicted RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 LRRC15Q8TF66 581 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 NXPE3Q969Y0 559 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 DDX27Q96GQ7 796 aaKnown RBP18.49■□□□□ 0.55
CGREF1-201ENST00000260595 TCHPQ9BT92 498 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 MFSD1Q9H3U5 465 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 SLC38A7Q9NVC3 462 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 KCNG1Q9UIX4 513 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 VWA8A3KMH1 1905 aa18.49■□□□□ 0.55
CGREF1-201ENST00000260595 H0Y858 1186 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 TRAPPC3O43617 180 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 PI15O43692 258 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 POU2F2P09086 479 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 NTHL1P78549 312 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 UVSSAQ2YD98 709 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 SLC10A6Q3KNW5 377 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 PPM1LQ5SGD2 360 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 AXDND1Q5T1B0 1012 aaPredicted RBP18.48■□□□□ 0.55
CGREF1-201ENST00000260595 LIN9Q5TKA1 542 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 KCNN1Q92952 543 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 C18orf25Q96B23 403 aaPredicted RBP18.48■□□□□ 0.55
CGREF1-201ENST00000260595 AK8Q96MA6 479 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 HAPLN2Q9GZV7 340 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 IRF2BPLQ9H1B7 796 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 FAM86C1Q9NVL1 165 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 WNT16Q9UBV4 365 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
CGREF1-201ENST00000260595 CDY1Q9Y6F8 540 aa18.48■□□□□ 0.55
CGREF1-201ENST00000260595 PODXLO00592 558 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 CCL16O15467 120 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 SLC26A4O43511 780 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 FSHRP23945 695 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 SMTNP53814 917 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
CGREF1-201ENST00000260595 GRIN1Q05586 938 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 MCL1Q07820 350 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 STRN3Q13033 797 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 HTR4Q13639 388 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 SEZ6Q53EL9 994 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 ZPBP2Q6X784 338 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 ANKS3Q6ZW76 656 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 SIX5Q8N196 739 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 FLCNQ8NFG4 579 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 SLC7A14Q8TBB6 771 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 CDK5RAP3Q96JB5 506 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 BLOC1S4Q9NUP1 217 aa18.47■□□□□ 0.55
CGREF1-201ENST00000260595 KRBA1A5PL33 1030 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 CFHP08603 1231 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 SRFP11831 508 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 HARSP12081 509 aaKnown RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 AOC1P19801 751 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 RPL9P32969 192 aaKnown RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 NCKAP1LP55160 1127 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 MRPL58Q14197 206 aaKnown RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 SLC8B1Q6J4K2 584 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 RTL10Q7L3V2 364 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 ST13P5Q8NFI4 369 aaPredicted RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 ATOH1Q92858 354 aaPredicted RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 ANKFY1Q9P2R3 1169 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 FBXL21Q9UKT6 434 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 CDH7Q9ULB5 785 aa18.46■□□□□ 0.55
CGREF1-201ENST00000260595 ZFP37Q9Y6Q3 630 aaPredicted RBP18.46■□□□□ 0.55
CGREF1-201ENST00000260595 DOCK8Q8NF50 2099 aa18.45■□□□□ 0.54
CGREF1-201ENST00000260595 XYLBO75191 536 aa18.45■□□□□ 0.54
CGREF1-201ENST00000260595 CUL4AQ13619 759 aa18.45■□□□□ 0.54
CGREF1-201ENST00000260595 VARS2Q5ST30 1063 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms