RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SIK3Q9Y2K2 1263 aa6.56□□□□□ -1.36
TRA2B-201ENST00000259043 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 CXorf49A8MYA2 514 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 AGXTP21549 392 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 ECHS1P30084 290 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 GUCY1A2P33402 732 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 SLC5A3P53794 718 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 MBNL2Q5VZF2 373 aaKnown RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 OR10H5Q8NGA6 315 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 SLC46A2Q9BY10 475 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 PUS7LQ9H0K6 701 aaKnown RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 EIF2B4Q9UI10 523 aaKnown RBP6.55□□□□□ -1.36
TRA2B-201ENST00000259043 GPR45Q9Y5Y3 372 aa6.55□□□□□ -1.36
TRA2B-201ENST00000259043 STRCQ7RTU9 1775 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 NEO1Q92859 1461 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 WASHC2AQ641Q2 1341 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 RICTORQ6R327 1708 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 PJA2O43164 708 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 RECQL4O94761 1208 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 BMP5P22003 454 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 PTPN7P35236 360 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 SLC6A9P48067 706 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 MGAT2Q10469 447 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 SP140Q13342 867 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 FAM102AQ5T9C2 384 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-201ENST00000259043 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 LRRC55Q6ZSA7 311 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 GDF7Q7Z4P5 450 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 RPUSD2Q8IZ73 545 aaKnown RBP6.54□□□□□ -1.36
TRA2B-201ENST00000259043 RNF169Q8NCN4 708 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 OR2I1PQ8NGU4 316 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 DCLRE1CQ96SD1 692 aaKnown RBP6.54□□□□□ -1.36
TRA2B-201ENST00000259043 NEU1Q99519 415 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 MLST8Q9BVC4 326 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 TEX101Q9BY14 249 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 PCDHGA2Q9Y5H1 932 aa6.54□□□□□ -1.36
TRA2B-201ENST00000259043 ZNF185O15231 689 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 ITGB1P05556 798 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 LMO1P25800 156 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 CDKN1CP49918 316 aaPredicted RBP6.53□□□□□ -1.36
TRA2B-201ENST00000259043 AMPD3Q01432 767 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 NHLH2Q02577 135 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 EFCAB12Q6NXP0 572 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 PQLC1Q8N2U9 271 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 TFAP2CQ92754 450 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
TRA2B-201ENST00000259043 TTC37Q6PGP7 1564 aa6.52□□□□□ -1.36
TRA2B-201ENST00000259043 CFAP74Q9C0B2 1584 aa6.52□□□□□ -1.36
TRA2B-201ENST00000259043 ARID4BQ4LE39 1312 aaPredicted RBP6.52□□□□□ -1.37
TRA2B-201ENST00000259043 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 RBP3P10745 1247 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 FBLP22087 321 aaKnown RBP6.52□□□□□ -1.37
TRA2B-201ENST00000259043 MGAT1P26572 445 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 CLRN1P58418 232 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 RNASE9P60153 205 aaKnown RBP6.52□□□□□ -1.37
TRA2B-201ENST00000259043 RNF187Q5TA31 235 aaPredicted RBP6.52□□□□□ -1.37
TRA2B-201ENST00000259043 AFMIDQ63HM1 303 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 FAM180AQ6UWF9 173 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRA2B-201ENST00000259043 MYEOVQ96EZ4 313 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 ADI1Q9BV57 179 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 TRPM5Q9NZQ8 1165 aa6.52□□□□□ -1.37
TRA2B-201ENST00000259043 FHOD3Q2V2M9 1422 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 YEATS2Q9ULM3 1422 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 DRGXA6NNA5 263 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 FZD9O00144 591 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 SNRPA1P09661 255 aaKnown RBP6.51□□□□□ -1.37
TRA2B-201ENST00000259043 GSPT1P15170 499 aaKnown RBP6.51□□□□□ -1.37
TRA2B-201ENST00000259043 FPR1P21462 350 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 ADRA1BP35368 520 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 IARSP41252 1262 aaKnown RBP6.51□□□□□ -1.37
TRA2B-201ENST00000259043 NOMO1Q15155 1222 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 PDCD4Q53EL6 469 aaKnown RBP6.51□□□□□ -1.37
TRA2B-201ENST00000259043 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
TRA2B-201ENST00000259043 ZFP28Q8NHY6 868 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 LANCL2Q9NS86 450 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 GOLGA3Q08378 1498 aa6.51□□□□□ -1.37
TRA2B-201ENST00000259043 LTBP4Q8N2S1 1624 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 FANCAO15360 1455 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 GAGE12BA1L429 117 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 TMEM200CA6NKL6 621 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 MARCH11A6NNE9 402 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 PPM1GO15355 546 aaPredicted RBP6.5□□□□□ -1.37
TRA2B-201ENST00000259043 NCR1O76036 304 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 ENDOD1O94919 500 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 CDK11BP21127 795 aaKnown RBP6.5□□□□□ -1.37
TRA2B-201ENST00000259043 PCSK1P29120 753 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 WASP42768 502 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 FSTL1Q12841 308 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 MTMR1Q13613 665 aa6.5□□□□□ -1.37
TRA2B-201ENST00000259043 CCDC142Q17RM4 750 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms