RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 TAS1R1Q7RTX1 841 aa27.35■■□□□ 1.97
LSM7-201ENST00000252622 CD207Q9UJ71 328 aa27.35■■□□□ 1.97
LSM7-201ENST00000252622 BARX2Q9UMQ3 279 aaPredicted RBP27.35■■□□□ 1.97
LSM7-201ENST00000252622 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.35■■□□□ 1.97
LSM7-201ENST00000252622 TCHHQ07283 1943 aa27.35■■□□□ 1.97
LSM7-201ENST00000252622 TTC26A0AVF1 554 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 GRXCR2A6NFK2 248 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 TISP43B9A030 160 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 RBM10P98175 930 aaKnown RBP27.34■■□□□ 1.97
LSM7-201ENST00000252622 SOX4Q06945 474 aaPredicted RBP27.34■■□□□ 1.97
LSM7-201ENST00000252622 ELAVL2Q12926 359 aaKnown RBP27.34■■□□□ 1.97
LSM7-201ENST00000252622 UPP1Q16831 310 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 USP41Q3LFD5 358 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 ZBTB41Q5SVQ8 909 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 KIAA0319Q5VV43 1072 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 DCLRE1AQ6PJP8 1040 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 TMEM87AQ8NBN3 555 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 DDX27Q96GQ7 796 aaKnown RBP27.34■■□□□ 1.97
LSM7-201ENST00000252622 EMILIN2Q9BXX0 1053 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 TMEM206Q9H813 350 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 GDPD2Q9HCC8 539 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 CPSF3Q9UKF6 684 aaKnown RBP27.34■■□□□ 1.97
LSM7-201ENST00000252622 FAM50BQ9Y247 325 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 HCFC2Q9Y5Z7 792 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 TRIP11Q15643 1979 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 VCANP13611 3396 aa27.34■■□□□ 1.97
LSM7-201ENST00000252622 ADRB2P07550 413 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 AFMP43652 599 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 CLCNKBP51801 687 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 PPP2R3AQ06190 1150 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 EHHADHQ08426 723 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 SMAD4Q13485 552 aaKnown RBP27.33■■□□□ 1.97
LSM7-201ENST00000252622 POSTNQ15063 836 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 ENOX2Q16206 610 aaKnown RBP27.33■■□□□ 1.97
LSM7-201ENST00000252622 HASPINQ8TF76 798 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 CASP10Q92851 521 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 KLHL5Q96PQ7 755 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 TSPAN18Q96SJ8 248 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 BLZF1Q9H2G9 400 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 IKZF4Q9H2S9 585 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 RPF1Q9H9Y2 349 aaKnown RBP27.33■■□□□ 1.97
LSM7-201ENST00000252622 GOLGA2P5Q9HBQ8 144 aa27.33■■□□□ 1.97
LSM7-201ENST00000252622 AGO2Q9UKV8 859 aaKnown RBP27.33■■□□□ 1.97
LSM7-201ENST00000252622 PVALEFA0A1B0GWK0 134 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 ADSSP30520 456 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 SYKP43405 635 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 POU5F1Q01860 360 aaKnown RBP27.32■■□□□ 1.96
LSM7-201ENST00000252622 CUL4BQ13620 913 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 CLUL1Q15846 466 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 FAM26FQ5R3K3 315 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 KIAA1841Q6NSI8 718 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 PPFIBP1Q86W92 1011 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 SMRP1Q8NCR6 262 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 PAGE5Q96GU1 130 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 RXFP1Q9HBX9 757 aa27.32■■□□□ 1.96
LSM7-201ENST00000252622 CIZ1Q9ULV3 898 aaPredicted RBP27.32■■□□□ 1.96
LSM7-201ENST00000252622 PDCD11Q14690 1871 aaKnown RBP27.32■■□□□ 1.96
LSM7-201ENST00000252622 C2CD2LO14523 706 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 EIF3DO15371 548 aaKnown RBP eCLIP27.31■■□□□ 1.96
LSM7-201ENST00000252622 B3GAT3O94766 335 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 PRPF6O94906 941 aaKnown RBP27.31■■□□□ 1.96
LSM7-201ENST00000252622 CNPP09543 421 aaKnown RBP27.31■■□□□ 1.96
LSM7-201ENST00000252622 CASP1P29466 404 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 RPL9P32969 192 aaKnown RBP27.31■■□□□ 1.96
LSM7-201ENST00000252622 NDUFA8P51970 172 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 ANKRD54Q6NXT1 300 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 LLGL2Q6P1M3 1020 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 CD302Q8IX05 232 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 GRAMD1CQ8IYS0 662 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 SYCP3Q8IZU3 236 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 FSIP1Q8NA03 581 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 POMGNT1Q8WZA1 660 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 HPS3Q969F9 1004 aa27.31■■□□□ 1.96
LSM7-201ENST00000252622 C18orf25Q96B23 403 aaPredicted RBP27.31■■□□□ 1.96
LSM7-201ENST00000252622 UHRF1Q96T88 793 aaPredicted RBP27.31■■□□□ 1.96
LSM7-201ENST00000252622 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.31■■□□□ 1.961e-8■□□□□ 11.3
LSM7-201ENST00000252622 LACTBL1A8MY62 500 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 DLL1O00548 723 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 PODXLO00592 558 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 MBTPS2O43462 519 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 MYL1P05976 194 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 IL9P15248 144 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 HOXB8P17481 243 aaPredicted RBP27.3■■□□□ 1.96
LSM7-201ENST00000252622 GARTP22102 1010 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 CREMQ03060 361 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 CD300LGQ6UXG3 332 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 EPM2AIP1Q7L775 607 aaPredicted RBP27.3■■□□□ 1.96
LSM7-201ENST00000252622 GLIS3Q8NEA6 775 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 SLC22A17Q8WUG5 538 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 B3GALT6Q96L58 329 aa27.3■■□□□ 1.96
LSM7-201ENST00000252622 UBQLN1Q9UMX0 589 aaKnown RBP27.3■■□□□ 1.96
LSM7-201ENST00000252622 CYP3A5P20815 502 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 SMAD2Q15796 467 aaKnown RBP27.29■■□□□ 1.96
LSM7-201ENST00000252622 ZBTB6Q15916 424 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 FAM171A1Q5VUB5 890 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.29■■□□□ 1.96
LSM7-201ENST00000252622 C3orf58Q8NDZ4 430 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 KIF12Q96FN5 646 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 TTPALQ9BTX7 342 aa27.29■■□□□ 1.96
LSM7-201ENST00000252622 GOLPH3LQ9H4A5 285 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms