RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 NYXQ9GZU5 481 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 TMEM165Q9HC07 324 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 PRKAG3Q9UGI9 489 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 COL18A1P39060 1754 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SUPT3HO75486 399 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 KCNA3P22001 575 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 FOXN2P32314 431 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 MAN1A1P33908 653 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 VHLP40337 213 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 PPP4CP60510 307 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 CAV1Q03135 178 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 RCN1Q15293 331 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 GPATCH4Q5T3I0 446 aaKnown RBP9.83□□□□□ -0.84
SRSF6-201ENST00000244020 ACBD5Q5T8D3 534 aaPredicted RBP9.83□□□□□ -0.84
SRSF6-201ENST00000244020 DPY19L2P1Q6NXN4 242 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SUPT20HQ8NEM7 779 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 INPP5DQ92835 1189 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 ZCWPW1Q9H0M4 648 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 TRABDQ9H4I3 376 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 NINJ2Q9NZG7 142 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 ATP8B3O60423 1300 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 CCDC15Q0P6D6 951 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 WASHC2DQ5SRD0 308 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 RFX8Q6ZV50 586 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 ZDHHC14Q8IZN3 488 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SPATA17Q96L03 361 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 SAYSD1Q9NPB0 183 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 CHKBQ9Y259 395 aa9.83□□□□□ -0.84
SRSF6-201ENST00000244020 ALS2Q96Q42 1657 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 EMSYQ7Z589 1322 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 TGFB1I1O43294 461 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 RAB27AP51159 221 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CCNG1P51959 295 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 SNAP25P60880 206 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ITPK1Q13572 414 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 MFSD14BQ5SR56 506 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 SNX30Q5VWJ9 437 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 MTDHQ86UE4 582 aaKnown RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 UTP4Q969X6 686 aaKnown RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 RBM15Q96T37 977 aaKnown RBP eCLIP9.82□□□□□ -0.842e-12■■■■■ 71.4
SRSF6-201ENST00000244020 DENND2DQ9H6A0 471 aaPredicted RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 PIDD1Q9HB75 910 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CHST7Q9NS84 486 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ANAPC7Q9UJX3 599 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CYP26A1O43174 497 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 MAP3K7O43318 606 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 PPP1R11O60927 126 aaPredicted RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 KRT5P13647 590 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ACVR2BQ13705 512 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 IZUMO3Q5VZ72 239 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CLEC4GQ6UXB4 293 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CPNE8Q86YQ8 564 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CCDC125Q86Z20 511 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CCDC89Q8N998 374 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 BBOF1Q8ND07 529 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 BICD1Q96G01 975 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 STARD13Q9Y3M8 1113 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 CAPN9O14815 690 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ATP9AO75110 1047 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 SGPL1O95470 568 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 APOEP02649 317 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 GNAZP19086 355 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 RPS6KA3P51812 740 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 BFSP1Q12934 665 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 QRICH1Q2TAL8 776 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 PRPF31Q8WWY3 499 aaKnown RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 EIF2AK1Q9BQI3 630 aaKnown RBP9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ACP6Q9NPH0 428 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 PCDHA3Q9Y5H8 950 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 STK24Q9Y6E0 443 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 ROBO3Q96MS0 1386 aa9.82□□□□□ -0.84
SRSF6-201ENST00000244020 PLS3P13797 630 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 ACADSP16219 412 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 SP100P23497 879 aaPredicted RBP9.81□□□□□ -0.84
SRSF6-201ENST00000244020 PTPN4P29074 926 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 TUBP50607 506 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 YARSP54577 528 aaKnown RBP9.81□□□□□ -0.84
SRSF6-201ENST00000244020 GRAMD1BQ3KR37 738 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 ARMC3Q5W041 872 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 NLRP9Q7RTR0 991 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 PRUNE1Q86TP1 453 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 APLFQ8IW19 511 aaPredicted RBP9.81□□□□□ -0.84
SRSF6-201ENST00000244020 SCG3Q8WXD2 468 aaKnown RBP9.81□□□□□ -0.84
SRSF6-201ENST00000244020 CENPKQ9BS16 269 aa9.81□□□□□ -0.84
SRSF6-201ENST00000244020 ZNF142P52746 1687 aaPredicted RBP9.81□□□□□ -0.84
SRSF6-201ENST00000244020 FAM196BA6NMK8 535 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms