RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 VAMP7P51809 220 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SPDYAQ5MJ70 313 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SLFN13Q68D06 897 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 TMEM174Q8WUU8 243 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 CCDC17Q96LX7 622 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 PHTF1Q9UMS5 762 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 DCTN3O75935 186 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 ADRA2BP18089 450 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 HOXA13P31271 388 aaPredicted RBP14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 RNASELQ05823 741 aaKnown RBP14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 ADCY1Q08828 1119 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 RASA3Q14644 834 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 TRIP13Q15645 432 aaPredicted RBP14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SLC47A2Q86VL8 602 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 APLFQ8IW19 511 aaPredicted RBP14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 LMNTD2Q8IXW0 634 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 NUDCD1Q96RS6 583 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 HERPUD2Q9BSE4 406 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 MYH11P35749 1972 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 PSMD10O75832 226 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 BBOX1O75936 387 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 ABHD2P08910 425 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 GCLMP48507 274 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SLC18A1P54219 525 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 DNAJC3Q13217 504 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 PPP2R5CQ13362 524 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SGSM1Q2NKQ1 1148 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 FBXO11Q86XK2 927 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SYCP3Q8IZU3 236 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 ATL2Q8NHH9 583 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 UBN1Q9NPG3 1134 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 ACP6Q9NPH0 428 aa14.9□□□□□ -0.02
SCNN1A-201ENST00000228916 SMCHD1A6NHR9 2005 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 PRPF4O43172 522 aaKnown RBP eCLIP14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 CYP26A1O43174 497 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ACADSP16219 412 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 MUTP22033 750 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ZNF76P36508 570 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ADCY8P40145 1251 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 LBRQ14739 615 aaKnown RBP14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 APOBEC3HQ6NTF7 200 aaKnown RBP14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 NSMFQ6X4W1 530 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 TRABD2AQ86V40 505 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 PMM2O15305 246 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 NPTXRO95502 500 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 CACNB3P54284 484 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 NR1H3Q13133 447 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 LONP2Q86WA8 852 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 SHC3Q92529 594 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ZBTB10Q96DT7 871 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 WDR18Q9BV38 432 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 TLE6Q9H808 572 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 ZNFX1Q9P2E3 1918 aaKnown RBP14.89□□□□□ -0.03
SCNN1A-201ENST00000228916 EIF4E1BA6NMX2 242 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 EDF1O60869 148 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 RRM1P23921 792 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 RXRBP28702 533 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 ALDH3A1P30838 453 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 PCK1P35558 622 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 TMED2Q15363 201 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 THEMIS2Q5TEJ8 643 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 BBOF1Q8ND07 529 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 C9orf72Q96LT7 481 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 NACC1Q96RE7 527 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 SLCO1B3Q9NPD5 702 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 WRAP73Q9P2S5 460 aaPredicted RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 SERPINB2P05120 415 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 NEFHP12036 1026 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 EPHB2P29323 1055 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 PTDSS1P48651 473 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 RASSF2P50749 326 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 PDK4Q16654 411 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 C12orf56Q8IXR9 622 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 DAW1Q8N136 415 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 PLEKHO2Q8TD55 490 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 R3HDM2Q9Y2K5 976 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 KLHL33A6NCF5 533 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 CYP11B1P15538 503 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 GCAP28676 217 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 CDR2Q01850 454 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 CENPCQ03188 943 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 TCP10Q12799 353 aa14.88□□□□□ -0.03
SCNN1A-201ENST00000228916 SPARCL1Q14515 664 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms