RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ARMC9Q7Z3E5 817 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 MCOLN2Q8IZK6 566 aa23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMARCD2-201ENST00000225742 SIP14410 1827 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 E7EVH7 732 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 TRAPPC3O43617 180 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 SOX10P56693 466 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 PTP4A2Q12974 167 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 TMEM132BQ14DG7 1078 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 FNBP1Q96RU3 617 aa23.51■■□□□ 1.35
SMARCD2-201ENST00000225742 ECEL1O95672 775 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 LDHAP00338 332 aaKnown RBP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 RARGP13631 454 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 ADCY2Q08462 1091 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 EMC2Q15006 297 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 C6orf118Q5T5N4 469 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 APOBEC3FQ8IUX4 373 aaKnown RBP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 ZNF516Q92618 1163 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 BTBD6Q96KE9 485 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 STMN4Q9H169 189 aaPredicted RBP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 WHRNQ9P202 907 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 CHORDC1Q9UHD1 332 aaPredicted RBP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 LOC285556D6RIA3 1793 aa23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 MYH9P35579 1960 aaKnown RBP23.5■■□□□ 1.35
SMARCD2-201ENST00000225742 FAM170AA1A519 330 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 MEFVO15553 781 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 ATG7O95352 703 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 C4BPAP04003 597 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 CYP1A1P04798 512 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 TTC31Q49AM3 519 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 SAMD7Q7Z3H4 446 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 WRNIP1Q96S55 665 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 A1CFQ9NQ94 594 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 HOXC10Q9NYD6 342 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 ANAPC7Q9UJX3 599 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 AGO2Q9UKV8 859 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 LTBP3Q9NS15 1303 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 NFKBIEO00221 500 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 HLA-DRAP01903 254 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 NAMPTP43490 491 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 BAG6P46379 1132 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 POLGP54098 1239 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 HMGCS2P54868 508 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 CENPCQ03188 943 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 LIN9Q5TKA1 542 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 SMYD5Q6GMV2 418 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 RNF25Q96BH1 459 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 VCPIP1Q96JH7 1222 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 PORCNQ9H237 461 aa23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 MAFBQ9Y5Q3 323 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-201ENST00000225742 BRCA1P38398 1863 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 SEC24CP53992 1094 aa23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 CALCOCO2Q13137 446 aa23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 MTERF2Q49AM1 385 aa23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 TRMT10CQ7L0Y3 403 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 DNERQ8NFT8 737 aa23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 HOMER3Q9NSC5 361 aa23.48■■□□□ 1.35
SMARCD2-201ENST00000225742 TCRBV7S2A1N4TA0A589 114 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 AGTP01019 485 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 NSFP46459 744 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 OTUD6BQ8N6M0 293 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 CHST13Q8NET6 341 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 GRK7Q8WTQ7 553 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ZKSCAN4Q969J2 545 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 PI4K2AQ9BTU6 479 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 NIFKQ9BYG3 293 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 DHX33Q9H6R0 707 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 PPANQ9NQ55 473 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ZNF302Q9NR11 478 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 DOCK5Q9H7D0 1870 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 C5orf60A6NFR6 353 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ANKRD65E5RJM6 399 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 CAND2O75155 1236 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 OATP04181 439 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 TNNI1P19237 187 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 TBXAS1P24557 533 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ARL2P36404 184 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 PIK3CAP42336 1068 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 STXBP2Q15833 593 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 SGO2Q562F6 1265 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 NOL9Q5SY16 702 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 DEPTORQ8TB45 409 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 CYFIP2Q96F07 1278 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 CEP89Q96ST8 783 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ROPN1BQ9BZX4 212 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 TMEM134Q9H6X4 195 aa23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 ROPN1Q9HAT0 212 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-201ENST00000225742 MROH7Q68CQ1 1323 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 ITIH2P19823 946 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 RFC5P40937 340 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 CAV1Q03135 178 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 DRP2Q13474 957 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 PPP1R7Q15435 360 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 CPNE8Q86YQ8 564 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 RAPGEF5Q92565 580 aa23.46■■□□□ 1.35
SMARCD2-201ENST00000225742 CNTN6Q9UQ52 1028 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms