RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 FASTKD3Q14CZ7 662 aaKnown RBP16.08■□□□□ 0.17
EFNB1-201ENST00000204961 ACCSLQ4AC99 568 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 ANKS1BQ7Z6G8 1248 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 CCDC63Q8NA47 563 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.17
EFNB1-201ENST00000204961 TMEM206Q9H813 350 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.17
EFNB1-201ENST00000204961 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 NXF1Q9UBU9 619 aaKnown RBP16.08■□□□□ 0.17
EFNB1-201ENST00000204961 ODF2LQ9ULJ1 636 aa16.08■□□□□ 0.17
EFNB1-201ENST00000204961 CETPP11597 493 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 NEFHP12036 1026 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 CD19P15391 556 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 PEX5P50542 639 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 FUKQ8N0W3 1084 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 FHDC1Q9C0D6 1143 aaPredicted RBP16.08■□□□□ 0.16
EFNB1-201ENST00000204961 SAYSD1Q9NPB0 183 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 AGAP1Q9UPQ3 857 aa16.08■□□□□ 0.16
EFNB1-201ENST00000204961 DHX15O43143 795 aaKnown RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 ZNF862O60290 1169 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 KRT19P08727 400 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 KIF22Q14807 665 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 PARP9Q8IXQ6 854 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 PCSK1NQ9UHG2 260 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 H0Y3Z8 333 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 CTNNA2P26232 953 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 GAD2Q05329 585 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 RFX8Q6ZV50 586 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 SLCO1B3Q9NPD5 702 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 NOCTQ9UK39 431 aaKnown RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 A0A0A6YYK5 440 aaPredicted RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 GJB1P08034 283 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 MYO1EQ12965 1108 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 DNAJC3Q13217 504 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 SNCBQ16143 134 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 P3H1Q32P28 736 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
EFNB1-201ENST00000204961 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 ERMARDQ5T6L9 678 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 TXNRD3NBQ6F5E7 133 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 MKNK1Q9BUB5 465 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 ADAM7Q9H2U9 754 aa16.07■□□□□ 0.16
EFNB1-201ENST00000204961 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 PLCD4Q9BRC7 762 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 TTLL13PA6NNM8 815 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 WNT10BO00744 389 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 SLC39A4Q6P5W5 647 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 POLR3FQ9H1D9 316 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 GINS2Q9Y248 185 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 LRRD1A4D1F6 860 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 CCT8L1PA6NM43 557 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 TLR3O15455 904 aaKnown RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 POLGP54098 1239 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 IZUMO3Q5VZ72 239 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 RSBN1LQ6PCB5 846 aaPredicted RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 THNSL1Q8IYQ7 743 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 FAM151AQ8WW52 585 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 TMEM237Q96Q45 408 aa16.06■□□□□ 0.16
EFNB1-201ENST00000204961 RANBP17Q9H2T7 1088 aaKnown RBP16.06■□□□□ 0.16
EFNB1-201ENST00000204961 NCANO14594 1321 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 ZNF536O15090 1300 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 PTPRJQ12913 1337 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 ENTPD3O75355 529 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 DSG3P32926 999 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 ZNF131P52739 623 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 OVGP1Q12889 678 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 PGM5Q15124 567 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
EFNB1-201ENST00000204961 TMEM161BQ8NDZ6 487 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 HELQQ8TDG4 1101 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 RUBCNQ92622 972 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 KIFAP3Q92845 792 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 STAMBPL1Q96FJ0 436 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 GTF3C4Q9UKN8 822 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 RASA4BC9J798 803 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 CHUKO15111 745 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 RASA4O43374 803 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 NEBLO76041 1014 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 BTNL9Q6UXG8 535 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 FAM71AQ8IYT1 594 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 DCTN4Q9UJW0 460 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms