RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 C6orf118Q5T5N4 469 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 TBC1D1Q86TI0 1168 aaPredicted RBP8.85□□□□□ -0.99
CDC27-201ENST00000066544 CNOT10Q9H9A5 744 aaKnown RBP8.85□□□□□ -0.99
CDC27-201ENST00000066544 COL11A2P13942 1736 aaPredicted RBP8.85□□□□□ -0.99
CDC27-201ENST00000066544 TCP11X1B4DZS4 312 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 PIAS1O75925 651 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 CLTAP09496 248 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 MUTP22033 750 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 CYP24A1Q07973 514 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 ADCY2Q08462 1091 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 NUGGCQ68CJ6 796 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 EXOC3L1Q86VI1 746 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 NIM1KQ8IY84 436 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 SRRM1Q8IYB3 904 aaKnown RBP8.85□□□□□ -0.99
CDC27-201ENST00000066544 CD101Q93033 1021 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 IWS1Q96ST2 819 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 PCDHA10Q9Y5I2 948 aa8.85□□□□□ -0.99
CDC27-201ENST00000066544 TMEM120BA0PK00 339 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 P4HA2O15460 535 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 RARGP13631 454 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 EN1Q05925 392 aaPredicted RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 MYBPC2Q14324 1141 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 C4orf19Q8IY42 314 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 TBC1D31Q96DN5 1066 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 PCDHB4Q9Y5E5 795 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 RDXP35241 583 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 PIK3CAP42336 1068 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 MMP13P45452 471 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ALCAMQ13740 583 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 SNRNP48Q6IEG0 339 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 ZNF365Q70YC5 407 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 CCDC60Q8IWA6 550 aaPredicted RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 ATXN2LQ8WWM7 1075 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 PGM2Q96G03 612 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 GMLQ99445 158 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 POLR3FQ9H1D9 316 aaPredicted RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 SLC38A10Q9HBR0 1119 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 PXMP2Q9NR77 195 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ABCF3Q9NUQ8 709 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ANAPC5Q9UJX4 755 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 UMODL1Q5DID0 1318 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ZBED4O75132 1171 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 HLA-DRAP01903 254 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 CYP1A2P05177 515 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ATF2P15336 505 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 SLMAPQ14BN4 828 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 WDR44Q5JSH3 913 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 FAM47EQ6ZV65 393 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 TCHPQ9BT92 498 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 IFNB1P01574 187 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 NCKAP1LP55160 1127 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 TAS2R40P59535 323 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 CLEC16AQ2KHT3 1053 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 TARS2Q9BW92 718 aaKnown RBP8.84□□□□□ -0.99
CDC27-201ENST00000066544 PLVAPQ9BX97 442 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 XPNPEP1Q9NQW7 623 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ADAM22Q9P0K1 906 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 UVRAGQ9P2Y5 699 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
CDC27-201ENST00000066544 GRIN3BO60391 1043 aa8.83□□□□□ -1
CDC27-201ENST00000066544 ZSCAN5DPP0CG00 497 aa8.83□□□□□ -1
CDC27-201ENST00000066544 DPEP1P16444 411 aa8.83□□□□□ -1
CDC27-201ENST00000066544 DRG2P55039 364 aaKnown RBP8.83□□□□□ -1
CDC27-201ENST00000066544 KRT76Q01546 638 aa8.83□□□□□ -1
CDC27-201ENST00000066544 PLCB3Q01970 1234 aa8.83□□□□□ -1
CDC27-201ENST00000066544 BRDTQ58F21 947 aaPredicted RBP8.83□□□□□ -1
CDC27-201ENST00000066544 MCOLN2Q8IZK6 566 aa8.83□□□□□ -1
CDC27-201ENST00000066544 GPD1LQ8N335 351 aa8.83□□□□□ -1
CDC27-201ENST00000066544 ANKS4BQ8N8V4 417 aa8.83□□□□□ -1
CDC27-201ENST00000066544 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
CDC27-201ENST00000066544 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
CDC27-201ENST00000066544 ZNF317Q96PQ6 595 aaPredicted RBP8.83□□□□□ -1
CDC27-201ENST00000066544 CCT8L1PA6NM43 557 aa8.83□□□□□ -1
CDC27-201ENST00000066544 WDR46O15213 610 aaKnown RBP8.83□□□□□ -1
CDC27-201ENST00000066544 GAS8O95995 478 aa8.83□□□□□ -1
CDC27-201ENST00000066544 AGTP01019 485 aa8.83□□□□□ -1
CDC27-201ENST00000066544 BRAFP15056 766 aa8.83□□□□□ -1
CDC27-201ENST00000066544 TCF4P15884 667 aa8.83□□□□□ -1
CDC27-201ENST00000066544 DSG3P32926 999 aa8.83□□□□□ -1
CDC27-201ENST00000066544 HMGCS2P54868 508 aa8.83□□□□□ -1
CDC27-201ENST00000066544 PRKCEQ02156 737 aa8.83□□□□□ -1
CDC27-201ENST00000066544 CYB5D1Q6P9G0 228 aa8.83□□□□□ -1
CDC27-201ENST00000066544 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
CDC27-201ENST00000066544 FUKQ8N0W3 1084 aa8.83□□□□□ -1
CDC27-201ENST00000066544 CYP4X1Q8N118 509 aa8.83□□□□□ -1
CDC27-201ENST00000066544 ART4Q93070 314 aa8.83□□□□□ -1
CDC27-201ENST00000066544 MOV10L1Q9BXT6 1211 aaKnown RBP8.83□□□□□ -1
CDC27-201ENST00000066544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.83□□□□□ -11e-7■■■□□ 17.7
CDC27-201ENST00000066544 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
CDC27-201ENST00000066544 PTPRJQ12913 1337 aa8.83□□□□□ -1
CDC27-201ENST00000066544 PLSCR1O15162 318 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms