RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ces1fQ91WU0 561 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Sec16bQ91XT4 1051 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ears2Q9CXJ1 523 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Trim54Q9ERP3 366 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rsbn1lD3Z0K6 821 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Gm20721E9Q2U8 318 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 InhbeO08717 350 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 NumblO08919 604 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Znf652Q5DU09 608 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Capn11Q6J756 714 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Znf365Q8BG89 408 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Chst12Q99LL3 419 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ptpn4Q9WU22 926 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 AtrnQ9WU60 1428 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 C3P01027 1663 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Chd1P40201 1711 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Trpm3Q5F4S9 1721 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Gm4985A2ALC6 410 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Gm6685D3YYP3 228 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Epb41l4aP52963 686 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rasgrf2P70392 1189 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Q3U4G0 281 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Kiaa0319Q5SZV5 1081 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Krt75Q8BGZ7 551 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ccdc151Q8BSN3 593 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Q9CR55 154 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Snf8Q9CZ28 258 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Msh5Q9QUM7 833 aa13.04□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ifit3bE9PV48 403 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Psmc2P46471 433 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Il1rapl1P59823 695 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 HpcaP84075 193 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Pim2Q62070 370 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Scaf8Q6DID3 1268 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ttyh3Q6P5F7 524 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rbm15bQ6PHZ5 887 aaKnown RBP13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ccnt2Q7TQK0 723 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Azin2Q8BVM4 459 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Kiaa1024Q8K3V7 917 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Catsper1Q91ZR5 686 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Dctn2Q99KJ8 402 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Thumpd2Q9CZB3 528 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rsc1a1Q9ER99 582 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Dclre1aQ9JIC3 1026 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Cyp2ab1S4R196 498 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Fgfr1P16092 822 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Scarf2P59222 833 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Phactr1Q2M3X8 580 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Q3TTJ4 293 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Srek1ip1Q4V9W2 153 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Hif1aQ61221 836 aaKnown RBP13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Krt87Q6IMF0 495 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ttll4Q80UG8 1193 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ccdc169Q8BXX9 214 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Afg3l1Q920A7 789 aaKnown RBP13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Foxp3Q99JB6 429 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ppp1r3gQ9CW07 347 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rasgrp2Q9QUG9 608 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Arhgef37A1IGU4 676 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 E2f6O54917 272 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Hcn4O70507 1186 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 GfapP03995 430 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Faf1P54731 649 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Pstpip1P97814 415 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 DselQ0VBN2 1207 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Zcchc2Q69ZB8 1166 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Sh3d21Q7TSG5 549 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 KhnynQ80U38 671 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Apol9bQ8C7I4 310 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Apol9aQ8VDU3 310 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Fam187aQ9D3R5 417 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Tmem81Q9D5K1 259 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rassf7Q9DD19 359 aa13.03□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Pik3c2bE9QAN8 1632 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Pabpc1lA2A5N3 607 aaKnown RBP13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Gm5795E9PZN8 263 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Serpini1O35684 410 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Nqo1Q64669 274 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ubxn7Q6P5G6 467 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Tdpoz4Q6YCH2 370 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Sept9Q80UG5 583 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Cdan1Q8CC12 1239 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 ItpkaQ8R071 459 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Stx18Q8VDS8 334 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Kiaa2013Q91X21 634 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Cpne8Q9DC53 577 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Nap1l5Q9JJF0 156 aa13.02□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Mmrn2A6H6E2 943 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Tuft1O08970 390 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 PpargP37238 505 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Stat5bP42232 786 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 PrkacbP68181 351 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Wdr41Q3UDP0 460 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Vmn1r209Q5NC97 312 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 P4ha1Q60715 534 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Vav2Q60992 868 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Capn3Q64691 821 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Acap2Q6ZQK5 770 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Adamts2Q8C9W3 1213 aa13.02□□□□□ -0.33
Pcdh1-202ENSMUST00000159405 Pcolce2Q8R4W6 414 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms