RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Samsn1P57725 372 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tmprss9P69525 1065 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Pfkfb1P70266 471 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Grm6Q5NCH9 871 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Shroom1Q5SX79 823 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tmem151bQ68FE7 561 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 FAM120AQ6A0A9 1112 aaKnown RBP16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Krba1Q6NXZ1 1043 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cd300lfQ6SJQ7 337 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Znf507Q6ZPY5 941 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Casd1Q7TN73 797 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Q8BHR8 331 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gpatch3Q8BIY1 525 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 SowahaQ8BLS7 548 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ccdc169Q8BXX9 214 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Dnai1Q8C0M8 701 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Spata32Q8C5V0 334 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr458Q8VF80 313 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr457Q8VGP5 313 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Asb7Q91ZU0 318 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tubgcp4Q9D4F8 667 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cpsf3Q9QXK7 684 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Pds5aQ6A026 1332 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gm4985A2ALC6 410 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rab11fip2G3XA57 512 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 IapP03975 557 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gas2P11862 314 aaKnown RBP16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tbxas1P36423 533 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Hoxd13P70217 339 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Slc7a6osQ7TPE5 306 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Arhgap11aQ80Y19 987 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Lin9Q8C735 542 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Spice1Q8C804 860 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Syn3Q8JZP2 579 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Art3Q8R2G4 371 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Prpf6Q91YR7 941 aaKnown RBP16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Mcrs1Q99L90 462 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rpl17Q9CPR4 184 aaKnown RBP16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 SdhbQ9CQA3 282 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 BccipQ9CWI3 316 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ankef1Q9D2J7 775 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tmem86aQ9D8N3 241 aa16.72■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Pcsk5Q04592 1877 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ankrd34aB2RW11 495 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Eif3dO70194 548 aaKnown RBP16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Brcc3P46737 291 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Nlrp4cQ3TKR3 982 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Smyd5Q3TYX3 416 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gas2l3Q3UWW6 683 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 March6Q6ZQ89 909 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Clec16aQ80U30 1036 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Hgh1Q8C3I8 393 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Lamtor4Q8CF66 99 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Trim61Q8JZK6 461 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Mtif3Q9CZD5 276 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ribc1Q9D0B8 379 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 PrameQ9D4Z5 464 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cst12Q9DAN8 128 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Dnajc12Q9R022 198 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Bscl2Q9Z2E9 383 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 TectaO08523 2155 aa16.71■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rp1P56716 2095 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Lcmt1A0A0U1RNF2 332 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Herc3A6H6S0 1050 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Nlgn4lB0F2B4 945 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Fam170bE9PXT9 378 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Vmn2r19G5E8G4 854 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 BhmtO35490 407 aaKnown RBP16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Ccl4P14097 92 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Defa-rs2P17534 91 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Pax3P24610 479 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 SsbP32067 415 aaKnown RBP16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Txndc16Q7TN22 820 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Aggf1Q7TN31 711 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Zscan4cQ80VJ6 506 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Wscd1Q80XH4 572 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Plekhs1Q8BW88 474 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Ears2Q9CXJ1 523 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Sfmbt1Q9JMD1 863 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Pex11aQ9Z211 246 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Pcdh11xF6ZNL5 1338 aa16.7■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Plxna3P70208 1872 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Arid2E9Q7E2 1828 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Ccdc173A0JLY1 547 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Fibcd1A2AV25 459 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Bpifb4A2BGH0 617 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Cyp2b13A6H6J2 491 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Zscan29E9Q5B4 869 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Scrg1O88745 98 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 P01878 344 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Irf8P23611 424 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Slc26a1P58735 704 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Rin3P59729 980 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Znf354cQ571J5 560 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Znf235Q61116 645 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Nlrp14Q6B966 993 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 PdgfrlQ6PE55 375 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Znf579Q80VM4 562 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 SheQ8BSD5 492 aa16.69■□□□□ 0.26
Hmgb1-208ENSMUST00000139443 Fndc3aQ8BX90 1198 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 96.7 ms