RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gpbp1l1Q6NZP2 473 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ttc7aQ8BGB2 858 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Klhl2Q8JZP3 593 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ap3m2Q8R2R9 418 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 TraipQ8VIG6 470 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Eaf2Q91ZD6 262 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Olfr1354E9Q5G9 310 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Atf5O70191 283 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Slc38a7Q8BWH0 463 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Vmp1Q99KU0 406 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Slc40a1Q9JHI9 570 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 PdgfraP26618 1089 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 PygbQ8CI94 843 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Cadm1Q8R5M8 456 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ubxn8Q9QZ49 277 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ddx39bQ9Z1N5 428 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 MeiocA2AG06 965 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 NfibP97863 570 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mark2Q05512 776 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm156Q58A37 223 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ube4bQ9ES00 1173 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Orc1Q9Z1N2 840 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 E230025N22RikG5E8S3 482 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Usp17leQ7M764 540 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Trim65Q8BFW4 522 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Pnma1Q8C1C8 353 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ndufa13Q9ERS2 144 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Hcn2O88703 863 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Kcna5Q61762 602 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Dlgap3Q6PFD5 977 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Znf445Q8R2V3 986 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mrpl4Q9DCU6 294 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 PigbQ9JJQ0 542 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm3173A6NAS3 172 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm3020E9Q3J7 150 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm2897K7N6T7 172 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 InhbeO08717 350 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Actr2P61161 394 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Recql4Q75NR7 1216 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm3411Q8C7R2 150 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Zfp263Q8CF60 680 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Sik2Q8CFH6 931 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 BicralQ8CHH5 1074 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 DpydQ8CHR6 1025 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mrpl50Q8VDT9 159 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Lrrc59Q922Q8 307 aaKnown RBP12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fuca2Q99KR8 461 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rbp7Q9EPC5 134 aa12.53□□□□□ -0.4
Trim56-201ENSMUST00000054384 Dhx35A2ACQ1 703 aaKnown RBP12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Krt2Q3TTY5 707 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Tmem26Q3UP23 366 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 LdhdQ7TNG8 484 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Vipas39Q8BGQ1 491 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 WaslQ91YD9 501 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Map3k15A2AQW0 1331 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm29276A0A087WNW5 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21117A0A087WPJ9 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm20820A0A087WPP3 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm20937A0A087WQA3 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21258A0A087WQC7 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm28102A0A087WQL3 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21095A0A087WR14 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm20792A0A087WRF5 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21865A0A087WRL2 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm28576A0A087WRP6 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm28490A0A087WRT9 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21294A0A087WS79 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm20824A0A087WS97 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21996A0A087WSS9 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm28870A0A0A6YW38 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm29866A0A0A6YX04 222 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Eif2s1Q6ZWX6 315 aaKnown RBP12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Lrfn2Q80TG9 788 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm21627Q810R0 219 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 PawrQ925B0 333 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Clca1Q9D7Z6 913 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 StamP70297 548 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 4930430A15RikQ05AC5 485 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Tatdn3Q3U1C6 294 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ksr1Q61097 873 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Krt31Q61765 416 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fbxw7Q8VBV4 629 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rnf103Q9R1W3 683 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Nr1h3Q9Z0Y9 445 aa12.52□□□□□ -0.4
Trim56-201ENSMUST00000054384 Kcnma1Q08460 1209 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tmem134Q8R0J4 195 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Myh6Q02566 1938 aaKnown RBP12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Apol8A2VDH7 339 aaKnown RBP12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 2210016F16RikG3X8U3 338 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cyp2e1Q05421 493 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Lmntd2Q0VET5 664 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tmem247Q497K7 211 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Vmn1r209Q5NC97 312 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Pim2Q62070 370 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Suz12Q80U70 741 aaKnown RBP12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Elac2Q80Y81 831 aaKnown RBP12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Vps50Q8CI71 964 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ccdc80Q8R2G6 949 aa12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cse1lQ9ERK4 971 aaKnown RBP12.52□□□□□ -0.41
Trim56-201ENSMUST00000054384 Yeats2Q3TUF7 1407 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms