RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Nupr1Q9WTK0 80 aa12.35□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Phf11A6H5X4 337 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Zc3h7aE9PWW6 970 aaKnown RBP12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Lire1P11260 357 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Gja8P28236 440 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 PpargP37238 505 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Rfx2P48379 717 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Fitm2P59266 262 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 AcadsQ07417 412 aaKnown RBP12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 1700013D24RikQ0P521 120 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Grm2Q14BI2 872 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Tmem65Q4VAE3 234 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 DeptorQ570Y9 409 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Dph1Q5NCQ5 438 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Tfe3Q64092 572 aaKnown RBP12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Arhgap30Q640N3 1101 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Rad54bQ6PFE3 886 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Ano5Q75UR0 904 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Abtb2Q7TQI7 1024 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Igdcc3Q8BQC3 813 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Epn2Q8CHU3 595 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Lrrc41Q8K1C9 807 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Stxbp5Q8K400 1152 aaKnown RBP12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Tti1Q91V83 1085 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 YarsQ91WQ3 528 aaKnown RBP12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Cog2Q921L5 731 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Def8Q99J78 448 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Wars2Q9CYK1 360 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 EvplQ9D952 2035 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Zmym2Q9CU65 1376 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Nup188Q6ZQH8 1759 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Glt1d1A4FUP9 346 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Gm10110D3Z5M2 615 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Zfp408H7BX78 710 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Tagap1P0CAX8 505 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Cntn3Q07409 1028 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Fgfr1opQ66JX5 399 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 PhkbQ7TSH2 1085 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Arfip2Q8K221 341 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Arl8bQ9CQW2 186 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Terb2Q9D494 218 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Hsf2bpQ9D4G2 338 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Heg1E9Q7X6 1337 aa12.34□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Myh3P13541 1940 aa12.33□□□□□ -0.43
Vamp1-201ENSMUST00000032487 Zfc3h1B2RT41 1992 aaKnown RBP12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Gm10479K7N6H4 105 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 H2afzP0C0S6 128 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Polr2fP61219 127 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Rasgrf2P70392 1189 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 H2afvQ3THW5 128 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Agxt2Q3UEG6 513 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Cnga4Q3UW12 575 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Akap4Q60662 849 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Krt31Q61765 416 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Best3Q6H1V1 669 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Olfr118Q7TRJ6 321 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Wnk4Q80UE6 1222 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 PolrmtQ8BKF1 1207 aaKnown RBP12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Calml4Q91WQ9 153 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Slc25a19Q9DAM5 318 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Nudt12Q9DCN1 462 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Dnmt3aO88508 908 aaKnown RBP12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Casp1P29452 402 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Fdft1P53798 416 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 NogP97466 232 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 4930430A15RikQ05AC5 485 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Plbd2Q3TCN2 594 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Dpcr1Q3TNW5 500 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Tmtc2Q56A06 836 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Usp1Q8BJQ2 784 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Rasgrp4Q8BTM9 673 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Fbxl13Q8CDU4 790 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Q8CIL4 281 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Bbs7Q8K2G4 715 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Ttll1Q91V51 423 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Q91Z58 1206 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Bbox1Q924Y0 387 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Bpifa3Q9D9J8 232 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Slc13a1Q9JHI4 594 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Gtf2ird1Q9JI57 1104 aaKnown RBP12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 UtrnE9Q6R7 3430 aa12.33□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Pde8bE9Q4S1 865 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Abl1P00520 1123 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Myl3P09542 204 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Serpinc1P32261 465 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 AaasP58742 546 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Fbp2P70695 339 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Spata5Q3UMC0 893 aaKnown RBP12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Cdcp1Q5U462 833 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Retreg2Q6NS82 541 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Arhgef18Q6P9R4 1021 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Ppp1r12bQ8BG95 976 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Lrif1Q8CDD9 755 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 PhykplQ8R1K4 467 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 SfpqQ8VIJ6 699 aaKnown RBP12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Zfp617Q91WM0 559 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Ndufb5Q9CQH3 189 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 IvdQ9JHI5 424 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 Nr2e3Q9QXZ7 395 aa12.32□□□□□ -0.44
Vamp1-201ENSMUST00000032487 CenpaO35216 134 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms