RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Erich5Q8K0S2 362 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fcho1Q8K285 873 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tm9sf1Q9DBU0 606 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Jph2Q9ET78 696 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pcsk1nQ9QXV0 258 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CtsfQ9R013 462 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fem1bQ9Z2G0 627 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Znf711A2ANX9 761 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zfp266E9Q2S7 604 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Il27raO70394 623 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tdpoz2Q717B2 364 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ric8bQ80XE1 520 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Stxbp5Q8K400 1152 aaKnown RBP10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sertad1Q9JL10 236 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Extl3Q9WVL6 918 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zfyve9A2A8R0 1397 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Naaladl2A0A0N4SUJ3 795 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm3460E9QAI8 215 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Myl2P51667 166 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tab3Q571K4 716 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 XiapQ60989 496 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Olfr866Q8VFI7 312 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 DtnaQ9D2N4 746 aa10.67□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Akap10O88845 662 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Mgat1P27808 447 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Akr1b1P45376 316 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Actr2P61161 394 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam89aQ14BJ1 175 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tdpoz4Q6YCH2 370 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmtc3Q8BRH0 920 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sesn3Q9CYP7 492 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lrrc46Q9DAP0 323 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Serpinb3cA2RSF9 386 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Abcb5B5X0E4 1255 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm4871D3Z0W7 314 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Psmc3O88685 442 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CiitaP79621 1155 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 MyrfQ3UR85 1138 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ezh2Q61188 746 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ssxb5Q6XAS2 159 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Otop3Q80UF9 577 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Taf6lQ8R2K4 616 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 MydgfQ9CPT4 166 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Smyd3Q9CWR2 428 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Usp14Q9JMA1 493 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Vnn1Q9Z0K8 512 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pde8aO88502 823 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp1b3P97370 278 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 HexdcQ3U4H6 486 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sfi1Q3UZY0 1216 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rpf1Q7TND5 349 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmem59lQ7TNI2 337 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Scfd1Q8BRF7 639 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nlrp4bQ8C6J9 863 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ivns1abpQ920Q8 642 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 NonoQ99K48 473 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Abcb1bP06795 1276 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 LtbrP50284 415 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 RenbpP82343 430 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Dna2Q6ZQJ5 1062 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tmc8Q7TN58 722 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam102bQ8BQS4 339 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Scfd2Q8BTY8 684 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Swi5Q8K3D3 89 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 OafQ8QZR4 282 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cap2Q9CYT6 476 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rassf7Q9DD19 359 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ppp2r3cQ9JK24 453 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Vwa3aQ3UVV9 1148 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Orc2Q60862 576 aaKnown RBP10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Chi3l1Q61362 389 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Epha7Q61772 998 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tfdp2Q64163 446 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ppm1mQ8BU27 406 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Prl7b1Q8CGZ9 251 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lpin2Q99PI5 893 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Dctn3Q9Z0Y1 186 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gdf11Q9Z1W4 405 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rnf17Q99MV7 1640 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 JcadQ5DTX6 1320 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PolgP54099 1218 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tas2r109Q7M707 316 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Stx5Q8K1E0 355 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ttc33Q9D6K7 262 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 4930407I10RikD3Z5T8 1512 aa10.66□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tph1P17532 447 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 AdssP46664 456 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ThraP63058 492 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SugctQ7TNE1 436 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc4a7Q8BTY2 1034 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cpa5Q8R4H4 436 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Snx2Q9CWK8 519 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ccndbp1Q3TVC7 356 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nmrk1Q91W63 195 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc12a6Q924N4 1150 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nr1h3Q9Z0Y9 445 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam47eD3YWC7 402 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Adam15O88839 864 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 GscQ02591 256 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 RelaQ04207 549 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms