RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Tgoln2Q62314 363 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ubap1Q8BH48 502 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zfp120Q8BZW4 436 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Gle1Q8R322 699 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ccdc182Q9D9C6 152 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fundc1Q9DB70 155 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Net1Q9Z206 595 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Eno1P17182 434 aaKnown RBP19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Irx1P81068 480 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rassf9Q8K342 435 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Lpgat1Q91YX5 370 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Nxf1Q99JX7 618 aaKnown RBP19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 AfmO89020 608 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Akr1b8P45377 316 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Psmc4P54775 418 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ttc39dQ0VF76 604 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Fam92bQ3V2J0 292 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ppp1r1bQ60829 194 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Zswim6Q80TB7 1207 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Ciapin1Q8WTY4 309 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rnf25Q9QZR0 456 aa19.59■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Aff1O88573 1216 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Casp7P97864 303 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Grm2Q14BI2 872 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Wdr18Q4VBE8 431 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Cfap36Q8C6E0 343 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Tdrd1Q99MV1 1172 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 IkbipQ9DBZ1 373 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rnf14Q9JI90 485 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Olig1Q9JKN5 260 aa19.58■□□□□ 0.73
Ccdc3-201ENSMUST00000027988 Rfx8D3YU81 596 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Klrk1O54709 232 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Bace1P56818 501 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ugt1a2P70691 533 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tgfbrap1Q3UR70 860 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 HarsQ61035 509 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Rnf139Q7TMV1 668 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Dus1lQ8C2P3 475 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Vmn1r64Q8R2B8 320 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Hdac9Q99N13 588 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Rab11fip1Q9D620 645 aa19.58■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gm5926E9PWJ8 236 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tnfrsf18O35714 228 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Casp14O89094 257 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Fgfr1P16092 822 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Adcy8P97490 1249 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tbc1d1Q60949 1255 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 SnphQ80U23 495 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Thoc1Q8R3N6 657 aaKnown RBP19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Wrap53Q8VC51 532 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Pcdha2Q91Y17 948 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 SncbQ91ZZ3 133 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Serpinb6eI7HJI3 429 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Per1O35973 1291 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Krt8P11679 490 aaKnown RBP19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Bmp2P21274 394 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Rab21P35282 222 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ephb2P54763 986 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 ZufspQ3T9Z9 577 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Pid1Q3UBG2 217 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Zcwpw1Q6IR42 630 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Cplx3Q8R1B5 158 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gtf3c6Q9D8P7 227 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Q9DA42 136 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ddx24Q9ESV0 857 aaKnown RBP19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ecel1Q9JMI0 775 aa19.57■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gon4lQ9DB00 2260 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Pds5aQ6A026 1332 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gm28360A0A087WR25 190 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gm5936A2BG95 728 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gm5640A3KG49 728 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Cyp2b9P12790 491 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Dnajc8Q6NZB0 253 aaKnown RBP19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ttc1Q91Z38 292 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tlr3Q99MB1 905 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Nudt5Q9JKX6 218 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tspoap1Q7TNF8 1846 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 PatjQ63ZW7 1834 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Nup62clA2AG10 272 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Rpl7aP12970 266 aaKnown RBP19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Uhmk1P97343 419 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Igsf9Q05BQ1 1179 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Pih1d3Q3KNI6 218 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Rnf10Q3UIW5 804 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Capn13Q3UW68 665 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Srd5a1Q68FF9 255 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Scrn2Q8VCA8 425 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ankef1Q9D2J7 775 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tlr9Q9EQU3 1032 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Col4a3Q9QZS0 1669 aa19.56■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Gm13084A2A8N0 494 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Prdm12A2AJ77 365 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Tmx4Q8C0L0 335 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ugt3a2Q8JZZ0 523 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Polr3fQ921X6 316 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 H2-OaQ9QWV1 250 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Stk11Q9WTK7 436 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Ripor3A1L3T7 938 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Art2bO35975 289 aa19.55■□□□□ 0.72
Ccdc3-201ENSMUST00000027988 Atf2P16951 487 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms