RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	RAX2	Q12465	1220 aa		2.25	□□□□□ -2.05
DBF20	YPR111W	MET2	P08465	486 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	RPL27A	P0C2H6	136 aa	Known RBP	2.24	□□□□□ -2.05
DBF20	YPR111W	RPL27B	P0C2H7	136 aa	Known RBP	2.24	□□□□□ -2.05
DBF20	YPR111W	ERD2	P18414	219 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	CDC10	P25342	322 aa	Known RBP	2.24	□□□□□ -2.05
DBF20	YPR111W	ZRT3	P34240	503 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	TAF14	P35189	244 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	CSG2	P35206	410 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	DBP7	P36120	742 aa	Known RBP	2.24	□□□□□ -2.05
DBF20	YPR111W	MRPL39	P36533	70 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	YHL049C	P38722	271 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	TEM1	P38987	245 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	SEO1	P39709	593 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	RSM25	P40496	264 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	SYS1	P41544	203 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	YGR067C	P53243	804 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	RSM27	P53305	110 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	FYV6	P53913	173 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	RHO3	Q00245	231 aa	Known RBP	2.24	□□□□□ -2.05
DBF20	YPR111W	MRS2	Q01926	470 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	PLB3	Q08108	686 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	YAL067W-A	Q8TGK6	75 aa		2.24	□□□□□ -2.05
DBF20	YPR111W	KSS1	P14681	368 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	YCR025C	P25352	136 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	CBT1	P36038	271 aa	Predicted RBP	2.23	□□□□□ -2.05
DBF20	YPR111W	NUP57	P48837	541 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	NNT1	Q05874	261 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	MCH1	Q07376	486 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	YOL029C	Q08187	201 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	YOR186W	Q08560	144 aa		2.23	□□□□□ -2.05
DBF20	YPR111W	ADH1	P00330	348 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	RPS19A	P07280	144 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	RPS19B	P07281	144 aa	Predicted RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	ZWF1	P11412	505 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	ADE1	P27616	306 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
DBF20	YPR111W	ATP7	P30902	174 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YNL194C	P40169	301 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YMR144W	P40214	342 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	SNZ3	P43545	298 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	ILM1	P47155	203 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YJR141W	P47172	347 aa	Predicted RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	OST3	P48439	350 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	COQ5	P49017	307 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YNL046W	P53956	172 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	GOT1	Q03554	138 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YPR172W	Q06608	200 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	ATG5	Q12380	294 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	EMP46	Q12396	444 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	LSO2	Q3E772	92 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	HTB1	P02293	131 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	HTB2	P02294	131 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	CUP2	P15315	225 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	PPH21	P23594	369 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	RFA3	P26755	122 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	RPB9	P27999	122 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	ECM13	P38195	257 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	TRM7	P38238	310 aa	Known RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	YIL012W	P40551	113 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YIL001W	P40560	513 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	RPE1	P46969	238 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	SNZ2	P53824	298 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	SWT21	P53873	357 aa	Predicted RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	SMD1	Q02260	146 aa	Predicted RBP	2.22	□□□□□ -2.05
DBF20	YPR111W	YMR244W	Q04018	355 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	YDR222W	Q04925	415 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	ISD11	Q6Q560	94 aa		2.22	□□□□□ -2.05
DBF20	YPR111W	QCR7	P00128	127 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	YOL163W	P0CF20	169 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	MATALPHA2	P0CY08	210 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	HMLALPHA2	P0CY09	210 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	URA6	P15700	204 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	VPS51	P36116	164 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	SUR2	P38992	349 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	YER189W	P40104	122 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	ADO1	P47143	340 aa	Known RBP	2.21	□□□□□ -2.06
DBF20	YPR111W	TRM9	P49957	279 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	HOP2	P53187	214 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	OSH6	Q02201	448 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	FAR8	Q05040	523 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	HEM25	Q07534	307 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	YRA1	Q12159	226 aa	Known RBP	2.21	□□□□□ -2.06
DBF20	YPR111W	YLR126C	Q12288	251 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	CMC2	Q3E7A4	109 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	YCL012C	Q8J0M4	134 aa		2.21	□□□□□ -2.06
DBF20	YPR111W	YDR157W	A0A023PZE8	133 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	RPL28	P02406	149 aa	Known RBP	2.2	□□□□□ -2.06
DBF20	YPR111W	COX10	P21592	462 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	ARC19	P33204	171 aa	Known RBP	2.2	□□□□□ -2.06
DBF20	YPR111W	TRR2	P38816	342 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	YER034W	P40022	185 aa	Known RBP	2.2	□□□□□ -2.06
DBF20	YPR111W	YFL012W	P43580	148 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	RMR1	P53060	241 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	CAX4	P53223	239 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	YET3	Q07451	203 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	YPL264C	Q08980	353 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	YDL211C	Q12121	372 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	YDL012C	Q12489	107 aa		2.2	□□□□□ -2.06
DBF20	YPR111W	AUS1	Q08409	1394 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms