RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP41	YPR040W	PER33	Q12144	273 aa		4.23	□□□□□ -1.73
TIP41	YPR040W	YOR114W	Q12219	294 aa		4.23	□□□□□ -1.73
TIP41	YPR040W	YOR029W	Q12243	111 aa		4.23	□□□□□ -1.73
TIP41	YPR040W	YBL111C	Q3E7Y5	667 aa		4.23	□□□□□ -1.73
TIP41	YPR040W	MRPL27	P36526	146 aa	Predicted RBP	4.22	□□□□□ -1.73
TIP41	YPR040W	YJR079W	P47126	109 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	YLR152C	P54072	576 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	PET117	Q02771	107 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	YMR244W	Q04018	355 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	SPG3	Q04398	127 aa	Predicted RBP	4.22	□□□□□ -1.73
TIP41	YPR040W	SFH1	Q06168	426 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	CTR3	Q06686	241 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	RAX2	Q12465	1220 aa		4.22	□□□□□ -1.73
TIP41	YPR040W	RRT13	P40042	185 aa		4.21	□□□□□ -1.74
TIP41	YPR040W	PRP24	P49960	444 aa	Known RBP	4.21	□□□□□ -1.74
TIP41	YPR040W	TIM8	P57744	87 aa		4.21	□□□□□ -1.74
TIP41	YPR040W	SEC13	Q04491	297 aa	Known RBP	4.21	□□□□□ -1.74
TIP41	YPR040W	TAF9	Q05027	157 aa		4.21	□□□□□ -1.74
TIP41	YPR040W	YOL024W	Q08172	172 aa		4.21	□□□□□ -1.74
TIP41	YPR040W	TPN1	P53099	579 aa		4.2	□□□□□ -1.74
TIP41	YPR040W	VHS1	Q03785	461 aa		4.2	□□□□□ -1.74
TIP41	YPR040W	UTP15	Q04305	513 aa	Known RBP	4.2	□□□□□ -1.74
TIP41	YPR040W	SDO1	Q07953	250 aa	Known RBP	4.2	□□□□□ -1.74
TIP41	YPR040W	YDR018C	Q12185	396 aa		4.2	□□□□□ -1.74
TIP41	YPR040W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TIP41	YPR040W	DAL81	P21657	970 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	LDB16	P25587	256 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	ARO4	P32449	370 aa	Known RBP	4.19	□□□□□ -1.74
TIP41	YPR040W	AEP1	P32493	518 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	SUA5	P32579	426 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	TIP20	P33891	701 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	ECM34	P38728	170 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	DDI1	P40087	428 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	COG7	P53195	279 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	BOP2	Q06150	570 aa		4.19	□□□□□ -1.74
TIP41	YPR040W	RLP24	Q07915	199 aa	Known RBP	4.19	□□□□□ -1.74
TIP41	YPR040W	PET494	P07390	489 aa	Predicted RBP	4.18	□□□□□ -1.74
TIP41	YPR040W	FRM2	P37261	193 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	PRS4	P38063	326 aa	Predicted RBP	4.18	□□□□□ -1.74
TIP41	YPR040W	FMC1	P40491	155 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	RPL10	P41805	221 aa	Known RBP	4.18	□□□□□ -1.74
TIP41	YPR040W	TIM21	P53220	239 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	SRL4	Q03085	281 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	YML018C	Q03730	393 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	RUD3	Q12234	484 aa	Known RBP	4.18	□□□□□ -1.74
TIP41	YPR040W	YLR046C	Q12253	270 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	ATG31	Q12421	196 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	YAL067W-A	Q8TGK6	75 aa		4.18	□□□□□ -1.74
TIP41	YPR040W	RPS3	P05750	240 aa	Known RBP	4.17	□□□□□ -1.74
TIP41	YPR040W	YCL042W	P25572	119 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	YCR016W	P25617	290 aa	Known RBP	4.17	□□□□□ -1.74
TIP41	YPR040W	ZRT3	P34240	503 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	DED81	P38707	554 aa	Known RBP	4.17	□□□□□ -1.74
TIP41	YPR040W	NPT1	P39683	429 aa	Known RBP	4.17	□□□□□ -1.74
TIP41	YPR040W	YIL012W	P40551	113 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	CPR7	P47103	393 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	IBA57	P47158	497 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	EMC4	P53073	190 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	RNY1	Q02933	434 aa	Known RBP	4.17	□□□□□ -1.74
TIP41	YPR040W	PIR1	Q03178	341 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	PAM18	Q07914	168 aa		4.17	□□□□□ -1.74
TIP41	YPR040W	SEC16	P48415	2195 aa	Known RBP	4.16	□□□□□ -1.74
TIP41	YPR040W	ADH1	P00330	348 aa	Known RBP	4.16	□□□□□ -1.74
TIP41	YPR040W	CBP6	P07253	162 aa	Predicted RBP	4.16	□□□□□ -1.74
TIP41	YPR040W	IMP1	P28627	190 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	MSN4	P33749	630 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	MBA1	P38300	278 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	URA8	P38627	578 aa	Predicted RBP	4.16	□□□□□ -1.74
TIP41	YPR040W	KRE29	P40026	464 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	AVT7	P40501	490 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	ASG7	P46993	209 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	YJR012C	P47087	207 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	NBP35	P52920	328 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	YGR018C	P53211	109 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	MRPL50	P53724	139 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	MNT4	P53745	580 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	VPS60	Q03390	229 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	YDR209C	Q03480	137 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	ATG10	Q07879	167 aa		4.16	□□□□□ -1.74
TIP41	YPR040W	JIP3	O13555	125 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	PPH21	P23594	369 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	YCR025C	P25352	136 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	SRB4	P32569	687 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	YOX1	P34161	385 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	SEN34	P39707	275 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	YGL118C	P53132	145 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	ARO80	Q04052	950 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	TSA2	Q04120	196 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	ARC18	Q05933	178 aa	Known RBP	4.15	□□□□□ -1.75
TIP41	YPR040W	SEC10	Q06245	871 aa		4.15	□□□□□ -1.75
TIP41	YPR040W	TAF14	P35189	244 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	AIM29	P36154	155 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	MRPL3	P36516	390 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	PRS2	P38620	318 aa	Known RBP	4.14	□□□□□ -1.75
TIP41	YPR040W	TCD1	P38756	429 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	YER085C	P40058	173 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	RRG9	P40156	214 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	YIL054W	P40524	105 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	EBS1	Q03466	884 aa	Known RBP	4.14	□□□□□ -1.75
TIP41	YPR040W	MSH5	Q12175	901 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms