RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W SWD3P38123 315 aa3.97□□□□□ -1.77
YDC1YPL087W STP2P38704 541 aa3.97□□□□□ -1.77
YDC1YPL087W YHR035WP38769 630 aa3.97□□□□□ -1.77
YDC1YPL087W MED6P38782 295 aa3.97□□□□□ -1.77
YDC1YPL087W IPI1P38803 334 aaPredicted RBP3.97□□□□□ -1.77
YDC1YPL087W SBE22P38814 852 aa3.97□□□□□ -1.77
YDC1YPL087W LYS12P40495 371 aaKnown RBP3.97□□□□□ -1.77
YDC1YPL087W PRM10P42946 383 aa3.97□□□□□ -1.77
YDC1YPL087W YAE1P47118 141 aaPredicted RBP3.97□□□□□ -1.77
YDC1YPL087W JHD2P47156 728 aaPredicted RBP3.97□□□□□ -1.77
YDC1YPL087W RAD17P48581 401 aa3.97□□□□□ -1.77
YDC1YPL087W VEL1P53058 206 aa3.97□□□□□ -1.77
YDC1YPL087W LSG1P53145 640 aaKnown RBP3.97□□□□□ -1.77
YDC1YPL087W NUP116Q02630 1113 aa3.97□□□□□ -1.77
YDC1YPL087W GPN3Q06543 272 aa3.97□□□□□ -1.77
YDC1YPL087W MHR1Q06630 226 aa3.97□□□□□ -1.77
YDC1YPL087W DCI1Q08558 271 aa3.97□□□□□ -1.77
YDC1YPL087W YLR126CQ12288 251 aa3.97□□□□□ -1.77
YDC1YPL087W JID1Q12350 301 aa3.97□□□□□ -1.77
YDC1YPL087W PCL9Q12477 304 aa3.97□□□□□ -1.77
YDC1YPL087W SUS1Q6WNK7 96 aa3.97□□□□□ -1.77
YDC1YPL087W LAG2Q92325 660 aa3.97□□□□□ -1.77
YDC1YPL087W CSF1Q12150 2958 aa3.96□□□□□ -1.77
YDC1YPL087W CYC3P06182 269 aa3.96□□□□□ -1.78
YDC1YPL087W RPS8AP0CX39 200 aaKnown RBP3.96□□□□□ -1.78
YDC1YPL087W RPS8BP0CX40 200 aaKnown RBP3.96□□□□□ -1.78
YDC1YPL087W TAH1P25638 111 aaPredicted RBP3.96□□□□□ -1.78
YDC1YPL087W YER079WP40052 210 aaKnown RBP3.96□□□□□ -1.78
YDC1YPL087W GDS1P41913 522 aa3.96□□□□□ -1.78
YDC1YPL087W NBP35P52920 328 aa3.96□□□□□ -1.78
YDC1YPL087W YGL101WP53144 215 aa3.96□□□□□ -1.78
YDC1YPL087W YGR067CP53243 804 aa3.96□□□□□ -1.78
YDC1YPL087W SNZ1Q03148 297 aa3.96□□□□□ -1.78
YDC1YPL087W MAK3Q03503 176 aa3.96□□□□□ -1.78
YDC1YPL087W YMR310CQ04867 317 aaPredicted RBP3.96□□□□□ -1.78
YDC1YPL087W ATG10Q07879 167 aa3.96□□□□□ -1.78
YDC1YPL087W TMC1Q08422 150 aaPredicted RBP3.96□□□□□ -1.78
YDC1YPL087W DPM1P14020 267 aaKnown RBP3.95□□□□□ -1.78
YDC1YPL087W SNF6P18888 332 aa3.95□□□□□ -1.78
YDC1YPL087W PHO80P20052 293 aa3.95□□□□□ -1.78
YDC1YPL087W RPB5P20434 215 aa3.95□□□□□ -1.78
YDC1YPL087W SPT14P32363 452 aa3.95□□□□□ -1.78
YDC1YPL087W HYM1P32464 399 aa3.95□□□□□ -1.78
YDC1YPL087W MKK1P32490 508 aa3.95□□□□□ -1.78
YDC1YPL087W YKL063CP35725 167 aa3.95□□□□□ -1.78
YDC1YPL087W RPS20P38701 121 aaKnown RBP3.95□□□□□ -1.78
YDC1YPL087W PAC11P40960 533 aa3.95□□□□□ -1.78
YDC1YPL087W BAT2P47176 376 aaKnown RBP3.95□□□□□ -1.78
YDC1YPL087W CWC23P52868 283 aaPredicted RBP3.95□□□□□ -1.78
YDC1YPL087W TPN1P53099 579 aa3.95□□□□□ -1.78
YDC1YPL087W MPC1P53157 130 aaKnown RBP3.95□□□□□ -1.78
YDC1YPL087W ORM1P53224 222 aa3.95□□□□□ -1.78
YDC1YPL087W MKC7P53379 596 aa3.95□□□□□ -1.78
YDC1YPL087W RRN9P53437 365 aa3.95□□□□□ -1.78
YDC1YPL087W MRPL50P53724 139 aa3.95□□□□□ -1.78
YDC1YPL087W RHO3Q00245 231 aaKnown RBP3.95□□□□□ -1.78
YDC1YPL087W YPL113CQ02961 396 aa3.95□□□□□ -1.78
YDC1YPL087W AIM36Q03798 255 aa3.95□□□□□ -1.78
YDC1YPL087W RNH202Q05635 350 aa3.95□□□□□ -1.78
YDC1YPL087W ASR1Q06834 288 aa3.95□□□□□ -1.78
YDC1YPL087W YOR114WQ12219 294 aa3.95□□□□□ -1.78
YDC1YPL087W TPO4Q12256 659 aa3.95□□□□□ -1.78
YDC1YPL087W YPR064WQ12492 139 aa3.95□□□□□ -1.78
YDC1YPL087W STF2P16965 84 aa3.94□□□□□ -1.78
YDC1YPL087W KRE6P32486 720 aa3.94□□□□□ -1.78
YDC1YPL087W SFC1P33303 322 aa3.94□□□□□ -1.78
YDC1YPL087W LHP1P33399 275 aaKnown RBP3.94□□□□□ -1.78
YDC1YPL087W YOR062CP36025 268 aa3.94□□□□□ -1.78
YDC1YPL087W TAE1P38340 232 aa3.94□□□□□ -1.78
YDC1YPL087W DED81P38707 554 aaKnown RBP3.94□□□□□ -1.78
YDC1YPL087W PET100P38958 111 aa3.94□□□□□ -1.78
YDC1YPL087W SWM2P40342 146 aa3.94□□□□□ -1.78
YDC1YPL087W ATG18P43601 500 aa3.94□□□□□ -1.78
YDC1YPL087W COQ5P49017 307 aa3.94□□□□□ -1.78
YDC1YPL087W BIO3P50277 480 aa3.94□□□□□ -1.78
YDC1YPL087W COS1P53822 381 aa3.94□□□□□ -1.78
YDC1YPL087W YLR152CP54072 576 aa3.94□□□□□ -1.78
YDC1YPL087W SEC13Q04491 297 aaKnown RBP3.94□□□□□ -1.78
YDC1YPL087W BOP2Q06150 570 aa3.94□□□□□ -1.78
YDC1YPL087W IPK1Q06667 281 aa3.94□□□□□ -1.78
YDC1YPL087W RRP40Q08285 240 aaKnown RBP3.94□□□□□ -1.78
YDC1YPL087W SAM4Q08985 325 aaKnown RBP3.94□□□□□ -1.78
YDC1YPL087W PBN1P25580 416 aa3.93□□□□□ -1.78
YDC1YPL087W YCR016WP25617 290 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W VMA8P32610 256 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W SHE2P36068 246 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
YDC1YPL087W YHK8P38776 514 aa3.93□□□□□ -1.78
YDC1YPL087W PRP39P39682 629 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W AIM2P39721 246 aa3.93□□□□□ -1.78
YDC1YPL087W GDI1P39958 451 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W SER3P40054 469 aa3.93□□□□□ -1.78
YDC1YPL087W YJL218WP40892 196 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W PFS2P42841 465 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W IRC18P47056 224 aa3.93□□□□□ -1.78
YDC1YPL087W TPS1Q00764 495 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W EGD1Q02642 157 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W GRX5Q02784 150 aa3.93□□□□□ -1.78
YDC1YPL087W YMR315WQ04869 349 aaKnown RBP3.93□□□□□ -1.78
YDC1YPL087W YPR172WQ06608 200 aa3.93□□□□□ -1.78
YDC1YPL087W SRO7Q12038 1033 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms